Pseudoxanthomonas mexicana: H4W19_15070
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Entry
H4W19_15070 CDS
T06805
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pmex
Pseudoxanthomonas mexicana
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmex03021
]
H4W19_15070 (rpoH)
Transcription machinery [BR:
pmex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H4W19_15070 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
Phage_terminase
HTH_11
KORA
HTH_10
UCR_14kD
GntR
HTH_15
Motif
Other DBs
NCBI-ProteinID:
QND79639
LinkDB
All DBs
Position
3217040..3217918
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AA seq
292 aa
AA seq
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MSQNTSTTALVANNLPIPSALGSLDAYISAVHQIPVLTVEDERALAQRYREEEDLDAARE
LVHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAE
MHEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAEEVSAIAKDLNVSEREVMEME
ARLSGRDIGFDAPADEDEDHAPPSPASYLVAHDEDPSQAYERADSEDNQLELLREGLANL
DDRSRDIIKRRWLDGESKVTLQELADEYGISAERVRQVEANALKKMKALFAA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacacctccactaccgctttggtcgccaacaacctgccgatccccagtgcc
ctgggctcgctcgacgcctacatcagcgccgtgcaccagatcccggtgctgacggtcgaa
gacgagcgcgccctggcgcagcgctaccgcgaagaggaagacctcgatgcggcccgcgaa
ttggtgcactcgcacctgcgtttcgtggtgcacgtggctcgcggctacaacggctacggc
ctgccgctgggcgacctgatccaggagggcaacatcggcctgatgaaggcggtgaagcgc
ttcgaccccgacatgggcgtgcgcctggtgagcttcgcggtgcactggatccgtgccgag
atgcacgagttcatcctgaagaactggcgcatcgtcaaggtcgccacgacgaaggcgcag
cgcaagctgttcttcaacctgcgcaagtccaagacgcgcctgggctggatgaatgccgaa
gaggtcagcgccatcgccaaggacctcaatgtgtccgagcgggaagtgatggagatggaa
gcgcgcctttccggtcgcgatatcgggttcgatgcccccgcggacgaagacgaggaccac
gcaccgccgtcgccggccagctacctggtcgcgcacgacgaggatccttcgcaggcctac
gaacgcgcagacagcgaggacaatcagctggaactgttgcgcgaaggcctggccaacctg
gacgaccggtcgcgcgacatcatcaagcgtcgctggctggatggcgaaagcaaggtcacg
ctgcaggaactcgccgacgagtacggcatctccgccgagcgcgtgcgccaggtcgaagcc
aatgcgctgaagaagatgaaggccctgttcgcggcctga
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