Pseudoxanthomonas mexicana: H4W19_15165
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Entry
H4W19_15165 CDS
T06805
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmex
Pseudoxanthomonas mexicana
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmex03032
]
H4W19_15165
03400 DNA repair and recombination proteins [BR:
pmex03400
]
H4W19_15165
Enzymes [BR:
pmex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H4W19_15165
DNA replication proteins [BR:
pmex03032
]
Prokaryotic type
DNA Topoisomerases
H4W19_15165
DNA repair and recombination proteins [BR:
pmex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H4W19_15165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QND79656
UniProt:
A0A7G6UKV9
LinkDB
All DBs
Position
complement(3236842..3239343)
Genome browser
AA seq
833 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNGFAMRYDLIDKN
EKHVEAIAKAAKGADDIFLATDPDREGEAISWHIAEILKERGLLKDKPLHRVVFTEITPR
AIKEAMTQPRQIAGDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFVAREYWSIEAECAHPRQAFTAKLTKLDGQKFEQFTVTDGDTAEAARLRIQQ
AAQGSLHVTDVSSKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVNIGDE
EGTVGLISYMRTDSVSLSAEALAEIRDVIARDFGTQALPDKPNVYVTKSKNAQEAHEAVR
PTSALRTPAQVARYLSDDERKLYDLIWKRAVACQMVPATLNTVSVDLAAGSQHSFRASGT
TVVDPGFLAVYEEGKDQKNAEDDDEGRKLPPMKPGDSVPLDRIHADQHFTQPPPRFTEAA
LVKALEEYGIGRPSTYASIIQTLIFRKYVEMEGRAFKPSDVGRAVSKFLSGHFTQYVDYD
FTAKLEDELDAVSRGEEEWIPLMEKFWGPFKELVAEKAETVDRSEATGARELGNDPKSGK
PVSVRLGRYGPYAQIGDKDTDEKLEFASLRPGQSMHTITLEDALELFKLPRKLGQDKGEE
VSVGIGRFGPFAKRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEFDGSDIQ
VLNGRFGPYISDGKLNGKIPKDREPASLTLEEVQKLLEETGKPVRRGFGAKKAAAKKVAV
KKEAAPKKTAAKKAPAKKAAKKATKKTATKKAATKKVAKKSVAKAAAGDDAPF
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgagtcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaggacttcaccgtcctggcgtcctatggccacgtccgggacctggtgccgaag
gaaggagcggtggacccggacaacgggttcgcgatgcgatacgacctgatcgacaagaac
gaaaagcacgtcgaagccatcgccaaggccgccaagggcgccgacgacatcttcctggcc
accgacccggaccgcgagggggaagccatcagctggcacatcgcggagatcttgaaggaa
cgcggcctgctgaaggacaagccgctgcaccgcgtggtgttcaccgagatcacgccgcgc
gccatcaaggaggcgatgacccagccgcgccagatcgccggcgacctggtcgacgcccag
caggcgcgtcgcgcgctggattacctggtcggcttcaacctgtcgcccgtgctgtggcgc
aaggtgcagcgcggcctgtccgctggccgcgtgcagtcgccggcgttgcgcatgatcgtg
gagcgcgaggaggagatcgaagccttcgtcgcccgcgaatactggagcatcgaagccgag
tgcgcgcatccgcgccaggccttcaccgccaagctcaccaaactggacgggcagaagttc
gaacagttcaccgtcaccgacggcgacaccgccgaagccgcacgcctgcgcatccagcag
gccgcgcagggttcgctgcacgtcaccgatgtcagcagcaaggaacgcaagcgtcgtccg
gcgccgccgttcaccacgtccacgctgcagcaggaagcctcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaagctgtacgaaggcgtcaacatcggcgacgag
gaaggcaccgtcggcctgatcagctacatgcgtaccgactcggtcagcctgtccgccgaa
gcgctggccgagatccgcgacgtcatcgcgcgcgacttcggcacgcaggccctgcccgac
aagcccaatgtctacgtcaccaagtccaagaacgcgcaggaagcgcacgaagcggtgcgc
ccgaccagcgcactgcgcacgccggcgcaggtcgcccgctacctgagcgacgacgagcgc
aagctctacgacctgatctggaagcgcgcggtcgcctgccagatggtgccggccacgctc
aacaccgtgtcggtcgacctggccgccggcagccagcacagcttccgcgccagcggcacc
accgtggtcgatcccggcttcctggccgtgtacgaggaaggcaaggaccagaagaacgcc
gaggacgacgatgaaggccgcaagctgccgccgatgaagcccggcgattcggtgccgctg
gaccgcatccacgccgaccagcatttcacccagccgccgccgcgcttcaccgaagcggcg
ctggtcaaggcgctggaggaatacggcatcggccgtccgtccacctacgcctcgatcatc
cagacgctgatcttccgcaagtacgtggaaatggaaggccgcgccttcaagcccagcgac
gtgggccgcgcggtcagcaagttcctgtccggccacttcacgcaatacgtggactacgat
ttcaccgccaagctggaggacgagctggacgccgtctcccgtggcgaggaagagtggatt
ccgctgatggagaagttctggggcccgttcaaggaactggtggccgaaaaggccgagacc
gtcgaccgcagcgaagccaccggcgcgcgcgagctgggcaacgatcccaagtccggcaag
ccggtcagcgtgcgtctgggccgctacgggccgtacgcgcagatcggcgacaaggacacc
gacgagaagctggagttcgcctcgctgcgccccggccagtcgatgcacaccatcaccctg
gaagacgcgctggagctgttcaagctgccgcgcaagctggggcaggacaagggcgaagag
gtcagcgtcggcatcggccgcttcggcccgttcgccaagcgtggcagcgtgtatgcgtcg
ctgaagaaggaagacgacccgtacacgatcgacctggcgcgcgcggtgttcctgatcgaa
gagaaggaagagatcgcgcgcaaccgcatcatcaaggaattcgacggcagcgacatccag
gtactcaacggccgcttcggcccgtacatcagcgacggcaagctcaacggcaagatcccg
aaggaccgcgagccggcgtctttgacgctggaggaagtgcagaagctgctggaggagacc
ggcaagcccgtgcgtcgcggtttcggcgccaagaaggccgccgcgaagaaggtggcggtg
aagaaggaagcggcgccgaagaagacggcggccaagaaagcgcccgcgaagaaggcggcg
aagaaagccaccaagaagaccgcgacgaagaaggcagcgaccaagaaagtggcgaagaaa
tccgtcgccaaggccgctgccggagacgacgcaccgttctga
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