Pseudoxanthomonas mexicana: H4W19_18080
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Entry
H4W19_18080 CDS
T06805
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H4W19_18080 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmex03021
]
H4W19_18080 (rpoA)
03400 DNA repair and recombination proteins [BR:
pmex03400
]
H4W19_18080 (rpoA)
Enzymes [BR:
pmex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H4W19_18080 (rpoA)
Transcription machinery [BR:
pmex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H4W19_18080 (rpoA)
DNA repair and recombination proteins [BR:
pmex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H4W19_18080 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QND80187
LinkDB
All DBs
Position
3866300..3867298
Genome browser
AA seq
332 aa
AA seq
DB search
MTGITQQVLRPRGPQIERLTGNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYSTIEGMQEDVLEVLLNLKDVAIRIHSGDSSTLSLAKQGPGVVTAGDIKTDHN
VEILNPELVICNLTKDTALNMRLKIERGFGYQPAAARRRPDEETRAIGRLVLDASFSPVR
RVAYAVESARVEQRTDLDKLVLDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
PKQAASGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtattactcagcaagtgctgcgcccccgcggcccgcagatcgagcgcctgacc
ggcaaccgtgcgaaggtggtcatcgaaccgctggagcgtggttacggccatacgctcggc
aatgcgttgcgccgcgtgctgctgtcgtcgatccccggcttcgcgatcaccgaagtcgag
atcgatggcgtgctgcacgaatacagcaccatcgaaggcatgcaggaagacgtgctggaa
gtgctgttgaacctgaaggatgtggccatccgcatccactccggcgactcgtccacgctg
agcctggccaagcagggcccgggcgtggtgaccgccggcgacatcaagaccgaccacaac
gtcgagatcctgaatccggaactggtcatctgcaacctgaccaaggacacggcgctgaac
atgcgcctgaagatcgagcgcggtttcggctaccagccggccgctgcccgccgccgtccg
gacgaagagacccgtgcgatcggccgcctggtgctggacgcctcgttctcgccggtccgt
cgcgtcgcgtacgcggtggaatccgcgcgcgtcgagcagcgcaccgacctggacaagctg
gtcctggacatcgagaccaacggcaccatcgacgccgaggaagccgtgcgcaccgccgcc
gacatcctcagcgaccagctgtcggtgttcggtgacttcacgcatcgcgaccgcggcgcg
ccgaagcaggctgccagcggcgttgatccggtgctgctgcgcccgatcgacgacctggag
ctgacggtgcgttcggccaactgcctgaaggccgagagcatctactacatcggcgacctg
atccagaagacggaagtcgaactgctcaagaccccgaacctcggcaagaagtcgctgacc
gagatcaaggaagtcctggcgcagcgcggcctgtccctgggcatgaagctggagaactgg
ccgccggccggtgtcgcccagcacggcatgctcggctga
DBGET
integrated database retrieval system
