Pseudoxanthomonas mexicana: H4W19_18220
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Entry
H4W19_18220 CDS
T06805
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pmex
Pseudoxanthomonas mexicana
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmex02000
]
H4W19_18220
Transporters [BR:
pmex02000
]
Other transporters
Pores ion channels [TC:
1
]
H4W19_18220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Autotransporter
OprF
DUF6089
DUF748
DUF481
DUF3575
Omp85
Motif
Other DBs
NCBI-ProteinID:
QND80215
LinkDB
All DBs
Position
3903747..3904847
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AA seq
366 aa
AA seq
DB search
MNKKILCAALLGGLSLANTAMAQEFDDRWYLTGSVGWNQQDSDRRTEDTQFGTLGLGKFI
SPNWSLDGELNYQNPNFNFDEDLNWSQYGISLDLRRHFIQEGRGWNPYIVAGLGMQRSEE
EYVINSPDSPAQRRDNNLAAKLGVGLQTTFDKRVAVRAEVAYRADFDDQSYTAEGGIHQQ
EESYFGDVLASIGVVIPLGPKAEAAAPPPPPAAPSCADLDDDGDGVNNCDDKCPGSQAGQ
TIGPDGCPVQVSIDLKGVNFDFDKSTLRPDAVAILSEAAEILKRYPDLRVEVAGHTDLCG
ADAYNQSLSQRRSQAVYDYLTSNGVDASRLVGPVGYGESRPLEPTAQTLPGCKSERNRRT
ELNVQN
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagattctctgcgccgcgctgctcggcggcctgagcctcgcgaacaccgcg
atggcgcaggaattcgacgaccgttggtacctgacgggttcggttggctggaaccagcag
gattccgaccgtcgtactgaagatacgcagttcggcaccctgggcctcggcaagttcatc
agcccgaactggtcgctggacggtgagctgaactaccagaatccgaacttcaactttgac
gaagacctgaactggagccagtacggcatctcgctggacctgcgtcgccacttcatccag
gaaggccgtggctggaacccgtacatcgtcgcgggcctgggcatgcagcgttcggaagaa
gagtacgtgatcaacagcccggactccccggcgcagcgtcgtgacaacaacctggctgcc
aagctgggcgtgggtctgcagaccaccttcgacaagcgcgtcgccgtgcgcgccgaagtg
gcctaccgcgccgacttcgacgaccagagctacaccgccgaaggtggcatccaccagcag
gaagagagctacttcggtgacgtgctggcttcgatcggcgtcgtgatcccgctgggtccg
aaggccgaagccgctgccccgccgccgccgccggccgccccgagctgcgccgacctggac
gacgacggcgacggcgtcaacaactgcgacgacaagtgccccggttcgcaggctggccag
accatcggtccggacggctgcccggtgcaggtctcgatcgacctgaagggcgtgaacttc
gacttcgacaagtcgacgctgcgtccggatgcggtcgcgatcctcagcgaagccgccgag
atcctgaagcgctatcccgacctgcgcgtcgaagtggccggccacaccgacctgtgcggt
gcggacgcctacaaccagtcgctgtcgcagcgtcgttcgcaggccgtgtacgactacctg
accagcaacggcgtcgacgcttcgcgcctggtgggcccggtgggttacggcgagagccgt
ccgctggagccgaccgcgcagaccctgccgggctgcaagagcgagcgcaaccgtcgtacg
gaactgaacgtccagaactga
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integrated database retrieval system
