Prochlorococcus marinus MIT 9303: P9303_06301
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Entry
P9303_06301 CDS
T00466
Symbol
topA
Name
(GenBank) Prokaryotic DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmf
Prochlorococcus marinus MIT 9303
Brite
KEGG Orthology (KO) [BR:
pmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmf03032
]
P9303_06301 (topA)
03400 DNA repair and recombination proteins [BR:
pmf03400
]
P9303_06301 (topA)
Enzymes [BR:
pmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
P9303_06301 (topA)
DNA replication proteins [BR:
pmf03032
]
Prokaryotic type
DNA Topoisomerases
P9303_06301 (topA)
DNA repair and recombination proteins [BR:
pmf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P9303_06301 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
MAJIN
Toprim_4
Wtap
Motif
Other DBs
NCBI-ProteinID:
ABM77382
UniProt:
A2C7C2
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All DBs
Position
593802..596552
Genome browser
AA seq
916 aa
AA seq
DB search
MQLACRCDKDWNGYISSVANTLVIVESPTKARTIRGFLPKDFRVEASMGHVRDLPNNASE
IPAAQKGQKWANLGVNTTADFEPLYVVPKDKKKVVKELKAALKEADQLLLATDEDREGES
ISWHLLQLLAPKVPVKRMVFHEITKEAIAKALDQPRDLDMELVHAQETRRILDRLVGYTL
SPLLWKKVAWGLSAGRVQSVSVRLLVQRERARRAFRSGSYWDLKAKLEKGGGQFEAKLTS
LDGQKIATGSDFDEATGALKAGRNVRLLGESDALTLSEAVRSSQWRVEAVEEKPTVRKPV
PPFTTSTLQQEANRKLRFSARETMRCAQGLYERGFITYMRTDSVHLSEQAIQAARSCVGS
RYGDDYLSKTPRQFSTKSRNAQEAHEAIRPAGESFRSPSESGLEGRDMALYELIWKRTVA
SQMAEARLTMLAVDLRVADAKFRATGKRIDFPGFFRAYVEGSDDPDAALEGQEVLLPDLA
VDDSPTLQDVEALGHQTQPPARYSEASLVKMLEKEGIGRPSTYASIIGTIVDRGYAALQN
NSLIPSFTAFAVTALLEEHFPDLVDTSFTARMEFTLDEISTGKVQWLPYLEGFYKGEKGL
ESQVQQREGDIDSSVSRTVDLEGLPCVVRIGRFGAYLEAKRVGDDGEEESLKATLPQEIT
PADLDAEKAELILKQKADGPESIGEDPETGDQVYLLFGQYGPYVQRGQVGEDNPKPKRAS
LPKGKKPDELSLDEALGLLRLPRLLGEHPDGGRIQAGLGRFGPYVVWDKSKGEKDYRSLK
GEDDVLAVGLSRALELLAMPKRGRGGRTALKDLGIPEGSEETVQVFDGPYGLYVKQGKLN
ASLPEGKGVDDISLDVAVELLAAKALSKKTSRRKKSTSTTSKKPAASKPKTPKPPATTKT
GRLRASAVRVIKPGEV
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgcttgccggtgcgataaagattggaacggttacatatcgtctgtggcgaac
actctggtcattgtcgaaagccctaccaaggcgagaaccattcgagggtttctgcccaag
gacttccgtgtggaggcctccatgggccatgtgcgcgacttgcccaacaacgccagtgag
atccctgcggcccagaaggggcagaaatgggccaacctcggcgtaaacaccaccgcggat
ttcgaacctctttatgtggttccgaaggacaaaaagaaggtggtcaaggagctgaaggca
gctttgaaggaggctgatcagctgttgttggcaactgacgaagatcgagagggcgaaagc
atcagctggcatttgctgcagctgttggctcccaaagtgcctgtcaagcggatggtgttt
cacgagatcaccaaagaagccattgctaaggctcttgatcagcccagagatctcgacatg
gagctggtccatgcccaggaaacgcgacggattcttgaccgtttggtgggatacacgctt
tcgcctctgttgtggaagaaggttgcatggggactctccgccggtcgggtgcagtcagtt
tctgtgcggttgcttgtgcagcgtgaacgtgcccgtagggctttccgtagcggcagctac
tgggacctaaaggccaaacttgaaaagggtggtggtcaatttgaggcaaagctcaccagt
ctggatggccagaagattgctaccggcagtgatttcgatgaagcgacaggcgctttaaag
gctggcagaaatgttcgactgcttggcgaatcagatgcgctcactctttccgaggccgtg
cgcagcagtcagtggcgggttgaggcggtggaagagaagccaacggtacgtaaaccggtg
cctcctttcacgacaagcactttgcagcaggaggcaaatcgcaagttgcggttttcggcc
agggaaacgatgcggtgtgcccaggggctttatgagcgtggcttcatcacctatatgcga
actgactctgtgcatctatccgagcaggctattcaggctgctcggagctgcgtggggtca
cgctatggcgatgattatctgagcaaaactccacgtcagttcagcactaagtcacgcaat
gcccaggaggctcacgaagcgatacgaccagcgggtgaaagcttccgttccccaagtgaa
tctgggcttgaagggcgcgacatggccctatatgagttgatttggaagcgaacagtggcc
agccagatggccgaggctcgactcaccatgctggctgttgatcttcgtgtggctgatgcc
aaatttcgggccacgggtaagcgcattgatttcccaggtttctttcgcgcttacgtggag
ggcagtgatgatccagacgctgccttggaaggccaggaagttttgctgcctgatttagcg
gttgacgattcgcccacgctgcaggatgtggaggccctcggtcaccagactcagccgccg
gctcgctatagcgaggcttcactggtgaagatgctcgagaaggagggcattggtaggcct
tccacctacgccagcatcatcggcaccatcgttgatcggggttatgcagcattgcaaaac
aactcccttattcccagtttcactgcttttgctgtaacggctcttctagaggagcatttc
ccagatcttgtcgataccagctttacggctcggatggaattcacgcttgatgagatttcc
acgggcaaggtgcagtggttgccttatctcgaagggttctacaagggcgaaaagggcctt
gagagtcaggttcagcagcgtgaaggtgacatcgactccagtgtgtctcgaactgtggat
ctggagggattgccctgtgtggtgcgcatcggtcgttttggggcctatctggaagccaaa
cgagtgggtgatgacggcgaggaggaatcgcttaaggccaccctccctcaagagatcacc
cctgctgatcttgatgcagagaaagccgagctgattctcaagcagaaagctgatggcccg
gaatcgattggggaagacccggaaaccggtgatcaggtttacctcctttttggtcagtac
gggccttatgtgcaacgaggccaggtgggtgaggacaaccccaagccgaagcgggcatcc
ttgcccaaaggcaagaagcctgatgagctcagccttgatgaggcactgggcttactgcgt
ctgccgcgcttactgggagagcatcccgatggtggacgaattcaggcgggtttgggtcgc
ttcggaccctatgtggtctgggataagagcaagggagagaaggactatcgctcccttaag
ggggaggatgacgtgctggcggtggggctgagccgtgcactagagcttttggcgatgccc
aagcggggcaggggcggccggactgcgttgaaagaccttggcatcccggaggggagtgag
gagacggtgcaggtttttgacggtccctatggcttgtatgtcaagcagggcaagctcaat
gcctcgttacctgaagggaagggcgtcgacgacatttctcttgatgtagcagtggagcta
ttggctgccaaggctttaagtaagaagacaagtcgacgcaaaaagagcacttcaacaacc
agcaaaaaacccgccgcaagcaaaccaaaaactcctaaaccacctgctactacaaagaca
ggtcggttgcgagccagtgctgttcgggtcatcaagcctggtgaggtttga
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