Prochlorococcus marinus MIT 9303: P9303_14771
Help
Entry
P9303_14771 CDS
T00466
Name
(GenBank) probable ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pmf
Prochlorococcus marinus MIT 9303
Brite
KEGG Orthology (KO) [BR:
pmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmf03016
]
P9303_14771
Enzymes [BR:
pmf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
P9303_14771
Transfer RNA biogenesis [BR:
pmf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
P9303_14771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ABM78223
UniProt:
A2C9R3
LinkDB
All DBs
Position
complement(1272073..1274124)
Genome browser
AA seq
683 aa
AA seq
DB search
MTPSLQQGDLVGFVLKGQPQIGLLTSLKGSRAIVSVAGTRREQQLASRELSVLKQKHNMV
EVETSLPTMSEVRNLSLNSRDLIAGWRLLEGERRKSKTSPTALKITELADLLLNKDDPIH
LAALWFWLNSDQPLFRVRRDHHVEARQLIDLRRIRQLRRKQQSRVQQRLDSLALLIADTP
LSKDQWQDLPSDLQLTINRLIELADGPEDAFLTDEQALELIKDLKLGRSLSDLRYWLIKK
GWRDPHDLTTLKGSIWTKSFEGSVQAQADQLLNKFEQLSFASDDSRLDLSDLRTYTLDDH
QTQEIDDAISLQSVDQDSWVWIHIADPARLIPVDSPLDLEARARATSLYLADGLRPMLPL
SVAAEVLSLRAGRRCAALSVAVVLDESGCIADTRVCRTWIRPCYRLTYEDGDELIELAPP
GDEDLSTLASLLKKRQLWRERQGALLLEQSEGRFKVKDDQPELHVVESTPARRLVSEAMI
LMGTVIAEFGKRQNLALPYRSQPPTQLPSATDLSQLIEGPVRHAAIKRCLSRGVLGTRPM
AHFSLGLSAYVQASSPIRRYADLLAHRQVVAHLGGSVPLSEHALMVQLDALEDPLRQAQQ
IQREDQRHWQKVWFLKHRHEQWPALFLRWLRPQDQIALVHVECLAMDLACKLNGLIDPIP
GLALIMTVLAIDPLTDQIELVAK
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgacgccttctctacagcaaggtgatttagttggctttgttttaaaaggtcaaccacaa
attggcctgctaacttccttgaagggcagccgagcaatcgtaagcgttgcaggaacacgg
cgagaacaacagctggccagtcgagagctgtccgttctaaagcaaaaacacaacatggta
gaggtggagacatctctacccacaatgagtgaggtccgtaaccttagtcttaattcacgc
gatttaattgctggttggcgattgctcgaaggcgaaaggcgtaaaagtaagacttcacca
acagcactcaaaattacagaactagctgatttactccttaataaagatgatcctatccat
ctcgcagcattgtggttttggcttaatagcgaccaacctttatttcgagttcgacgtgac
caccatgttgaagcacgtcaacttattgatctgcgccgcatccgccagctgcgccgcaag
caacaatctcgagtgcagcaacgcctagattctcttgcattgctgatagcagatacacct
ctgagcaaagatcagtggcaggatttaccctcggatcttcagttaactatcaaccgttta
atcgagttggctgacggtccagaggatgcttttttaacagatgagcaagctcttgagctg
attaaagatttaaagttgggtcgatcgctgagcgacctccgttattggttgatcaagaaa
ggctggcgcgatccacacgatctaacaactctcaaaggcagtatctggacaaaaagcttt
gaagggagtgtacaagctcaagcggaccaattactcaataagtttgagcaactatcgttc
gcaagcgatgatagtcgtcttgatttgagtgatttaagaacctacaccctcgacgatcat
caaactcaggaaattgatgatgcaatctctttgcagtctgttgatcaagacagctgggtt
tggatccatatcgccgatccggcaagacttattcctgttgacagccccttagatcttgag
gctcgtgcaagagcaaccagcctctacttggctgatggcctaagaccaatgctgccattg
agtgttgccgctgaagttctcagtcttagagctggccgtcgctgtgcagcgttgagtgtt
gctgtggttctagatgaatcaggatgtatagccgacactcgtgtttgtcgcacttggatt
cgcccctgctatcgactcacttatgaggatggggatgaattgattgagcttgcgcctcct
ggcgatgaagatctttcaacactcgcaagcctgctcaaaaaacgtcaattatggcgtgag
cgacaaggtgcactgctgcttgaacaatctgaagggcgattcaaagtcaaggatgatcag
cctgagcttcatgttgttgagtcaactccagccagacggttagtaagcgaagccatgatc
ctgatgggtactgttattgctgaatttggaaagcgtcaaaaccttgctctgccctatcgc
agccagcctccaactcaactacccagtgcaactgacttatcacagttgattgaaggacct
gtccgacatgccgcgatcaagcgttgccttagccgaggtgtccttggtactcgtccgatg
gctcatttcagtcttggcctctctgcctacgtacaagccagttcgccgatccgtcgctat
gcagatttacttgcccatcgacaggtggtggctcacttaggaggctcagttccattaagc
gagcacgctctcatggtgcagttggatgcacttgaagaccctcttcgccaagcacagcaa
atccaacgcgaagaccagcgacactggcaaaaggtgtggtttttaaaacatcgccatgaa
caatggccagccctatttctgcgctggttgagaccacaagatcagattgcacttgtgcat
gtggaatgcctggctatggatcttgcctgcaagctaaacggtttgatcgaccctattcca
ggtcttgcattgatcatgacagttcttgcaattgatccattgactgatcaaattgagttg
gtcgccaagtag
DBGET
integrated database retrieval system
