Prochlorococcus marinus MIT 9303: P9303_14981
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Entry
P9303_14981 CDS
T00466
Symbol
dacB
Name
(GenBank) putative D-Ala-D-Ala carboxypeptidase 3 (S13) family protein
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pmf
Prochlorococcus marinus MIT 9303
Pathway
pmf00550
Peptidoglycan biosynthesis
pmf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
P9303_14981 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmf01002
]
P9303_14981 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmf01011
]
P9303_14981 (dacB)
Enzymes [BR:
pmf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
P9303_14981 (dacB)
Peptidases and inhibitors [BR:
pmf01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
P9303_14981 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmf01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
P9303_14981 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ABM78244
UniProt:
A2C9T4
LinkDB
All DBs
Position
complement(1301260..1302579)
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AA seq
439 aa
AA seq
DB search
MKIIPASFQITKRTHSQLLIRILGAGGILIGSNVNAAPTVLSPPPPVAVQGWPSLQSGRL
CPSLQRSFKSLLGQGSSAWSVSVVDRHGQLLADINGTVAKVPASNQKLITTAFALDKLGP
DFKLRTQLLRRPDGVLEISGEGDPDLGITEIQRFAMAALGQGGSRTFRSHDDLQLLIREE
PQQRWWPSDWHPADRIYAYGAPITRLALTSNALDVAVTNPIGRLQRLLEREIHRQGGKAH
LSLVNHDQVKTSSAQSVLLHEEDSAPMHALVSLANAESHNFTAEVLLRHAAESWDVRLAS
REAMRWMQRQNLPLTGLRIADGSGLSRNNRMSSQTLATLLMRMGHHPLAPYYQASMAIAG
QRGTLRKLFRGTSLEGKFWGKTGTLNGVRSISGILETVDGPRYVSAIANGASSPNRTIGL
LLKATQRFSPCSSSLSTSN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaagattatccctgcaagtttccagatcactaagagaacccattctcaattgttaatc
cgaattcttggagctgggggaatcctgatcggttctaatgtgaatgcagccccaactgtt
ctttcaccaccccctccagttgccgtccagggctggccttctcttcaatctgggcgactc
tgcccttccttgcaaaggagtttcaaatccttactcggccagggctcatcggcatggagc
gtgagcgtcgtagatcgtcacggtcagctccttgcagacatcaacggaactgttgccaaa
gttccagcctccaatcagaagttgattacaacggcctttgcgctcgataagctcggccct
gatttcaagttgcgcacccaactattgcgacgccctgatggggtacttgaaatcagtggt
gaaggagatcctgatctaggtatcacagagatacaacgctttgcgatggcagctcttggt
cagggtggttctcgcacgtttcgttctcacgacgatctccaattactgatccgtgaggag
cctcaacaacgctggtggccaagtgattggcacccagctgaccgcatttatgcctatgga
gcaccgatcacccgtcttgcactaacaagcaatgcccttgatgtggctgtgaccaatcca
attggtcgtttacaacgcttgctagagcgcgaaatacatcggcaggggggcaaagctcat
ttaagccttgtcaaccacgaccaggtgaagacaagttctgcccagtccgttcttcttcat
gaggaagattccgcaccgatgcatgccttggtgagtcttgctaatgcggagagccataac
ttcacggcagaggtgctgcttcgacacgccgctgaaagctgggatgtgaggcttgcctcc
agggaggctatgcgctggatgcaaagacaaaatcttcctctgacagggctacgcatagcc
gacggcagcgggctctcaaggaacaaccgaatgagcagccaaactctggcgactttgttg
atgcgtatgggacatcaccctcttgctccctactatcaagcctcaatggccatcgcagga
cagcgtggaacgttgcgcaaactgtttagaggtacttccctagaagggaaattctgggga
aaaacaggcactctcaatggagtgcgttctatctcaggaattcttgagacagtagatgga
ccacgctacgtgagtgcaatagctaatggcgccagctcaccaaatagaacaatcggcttg
ttgttgaaggctacccaacgcttcagcccgtgttcttcatcgctctcaacttcgaattag
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