Prochlorococcus marinus MIT 9303: P9303_15831
Help
Entry
P9303_15831 CDS
T00466
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmf
Prochlorococcus marinus MIT 9303
Pathway
pmf03030
DNA replication
pmf03430
Mismatch repair
pmf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P9303_15831 (dnaE)
03430 Mismatch repair
P9303_15831 (dnaE)
03440 Homologous recombination
P9303_15831 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmf03032
]
P9303_15831 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmf03400
]
P9303_15831 (dnaE)
Enzymes [BR:
pmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P9303_15831 (dnaE)
DNA replication proteins [BR:
pmf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P9303_15831 (dnaE)
DNA repair and recombination proteins [BR:
pmf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P9303_15831 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABM78327
UniProt:
A2CA17
LinkDB
All DBs
Position
1386587..1390102
Genome browser
AA seq
1171 aa
AA seq
DB search
MAFVPLHNHSDYSLLDGATQLPQMVKRAKELGMPALALTDHGVMYGAIELLKLCKNAEIK
PIIGNEMYVINGSIEDPQPKKERRYHLVVLAKNAVGYRNLVKLTSISHLRGMRGRGIFAR
PCIDKELLKAYSEGLIVATACLGGEIPQAILRGRIDVARDVARWYQEVFGKDFYLEVQDH
GSPEDRIVNVEIVSIAKELGIELIATNDAHYLSKNDVEAHDALLCVLTGKLISDEKRLRY
TGTEYIKSEQEMGRLFADHLEPDVLQEAIANTAAVAEKVEEYSILGSYQMPRFPIPEGHS
AVSYLHEVSEQGLRQRLKLATADPIDDHYGERLTYELGVMEQMGFPTYFLVVWDYIRFAR
EQGIPVGPGRGSAAGSLVAYALGITNIDPVQNGLLFERFLNPERKSMPDIDTDFCIDRRG
EVIDYVTRRYGEDKVAQIITFNRMTSKAVLKDVARVLDIPYGDADRLAKLIPVVRGKPAK
LAAMIGSDSPNAEFREKYQNDPVVTKWVDMAMRIEGTNKTFGVHAAGVVIAAEPLDNLVP
LQRNNDGQVITQYFMEDVESMGLLKMDFLGLKNLTMIDKTLELVEISNGERIDPDQLPPE
DPETFALLARGDLEGIFQLESSGMRQIVRDLRPSSLEDISSILALYRPGPLDAGLIPKFI
NRKHGREAIDFAHAALEPILKETYGIMVYQEQIMKIAQDLAGYSLGEADLLRRAMGKKKV
SEMQKHRSIFVEGASRSGVDKKIADELFDQMVLFAEYCFNKSHSTAYGAVTYQTAYLKAH
YPVAYMASLLTVNAGASDKVQRYISNCNAMGIEVMPPDVNASGIDFTPAGDRILFGLSAV
RNLGDGAIRQLIANRDGDGPFVSLADLCDRLPSNVLNRRGLESLIHCGALDAIDPESNRA
QLIADLELLINWAASRARDRLSGQGNLFDLVAGAADEQTSDELSTAPKAAPVPDYPPTEK
LRLEKELVGFYLSDHPLKQLTAPAQLLAPIGLASLEDQPDKAKVSVITMLTEMRQVTTRK
GDRMAVLKIEDLTGGCEAVVFPKSYARLSDHLMLEARLLIWASVDRRDDRIQLIIDDCRA
IDDLRLLLVELMPDEACDITVQHKLRECLHQHRPAKDEFGVRVPVVAAVRQGPQVRYVCL
GHQFCVRDASAALSSLQQQEFKARCSDRLFV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgttcctcttcacaaccacagcgactacagccttctggacggagctacgcag
ctcccccagatggtgaagcgagccaaggagctaggcatgcctgctctggcactcacggac
cacggtgtgatgtatggcgccattgaactgctgaagctttgcaagaacgctgagatcaag
ccgatcatcggcaatgagatgtatgtgatcaacgggtccattgaggatccacaaccgaag
aaggagcgtcgttatcacctggtggtgcttgctaagaacgctgttggctatcgcaatctt
gtgaaactcaccagcattagccatctgcgcggtatgcgcggccgaggcatctttgcaagg
ccatgcattgataaagaactgctcaaggcctatagcgaggggttaattgttgccaccgct
tgtcttggtggggagattcctcaagccatcttgcgcggtcgcattgatgtagcaagggat
gtggcccgttggtaccaggaggtctttggcaaagacttctatctcgaagttcaggatcac
ggctcgccggaagaccgaatcgtcaatgtggagattgtgagcatcgccaaagagctaggg
attgagctgattgcgaccaatgacgcccattacctcagcaagaacgatgtggaggcccat
gacgccctgctttgtgtgctgacaggcaagttgatcagtgatgagaagcgtctgcgctac
acaggtactgaatacatcaagtctgaacaggagatgggacggctgttcgccgatcatctc
gagcctgatgtgctgcaagaggcgattgccaacacagcagccgttgccgaaaaggttgag
gaatactcaatcctcggtagttatcagatgcctcgtttcccgattccagaaggacatagc
gccgtgagttatctacacgaggtctcagagcaggggctacggcaaaggttgaaactggca
acggcagatccaattgatgaccattacggcgaaaggctcacctatgagctgggtgtgatg
gaacagatgggcttccccacctatttcctggtggtatgggattacatccgctttgcacgt
gaacagggcattccagtaggaccaggaagggggtcggccgctggctcactcgtggcatat
gcccttggtattaccaacattgatcctgttcaaaacggattgttatttgagcgattcctt
aatcctgagcgtaagtcgatgcctgatattgacactgatttctgtattgatcgtcgtggt
gaggtgatcgactatgtcacgcgtcgttacggcgaagacaaggttgctcaaattatcact
tttaaccgaatgacctccaaggccgtcttgaaggatgtagcccgggtgcttgatattccc
tatggagatgccgatcgacttgccaagcttattcccgtagtaaggggaaagcctgcaaag
ctagctgcgatgatcggcagcgattcgccgaatgctgaattccgtgagaagtatcagaac
gatccagtagttacaaaatgggtcgatatggcaatgcgaattgaaggtacaaataaaacc
tttggcgttcatgccgctggagtcgtcattgctgctgagcccctagataatcttgtaccg
cttcagcgtaataacgatggacaggtaattactcaatacttcatggaggatgtggagtcg
atggggttattgaagatggattttcttgggctcaagaatctcaccatgattgacaaaaca
cttgagcttgttgaaatcagcaatggagagagaattgatcctgatcaattgccaccagag
gatcctgaaacttttgccttacttgcaagaggagatcttgagggcatctttcaacttgaa
tcgagtgggatgagacagattgtgcgtgaccttcgcccctcatcacttgaagatatctcc
tcaattttagctttgtacagaccaggtcctttggatgccggattgattccaaaattcatc
aatcggaaacatggtcgagaggcaattgattttgctcatgctgcccttgaaccaatcctt
aaggagacttacgggatcatggtttatcaggagcagatcatgaagattgcccaggatctt
gctggctattctctcggcgaagctgacttgctgcggcgtgcaatgggcaagaaaaaggtt
tcagagatgcagaaacatcgcagtatttttgttgaaggtgcaagtcgaagtggtgttgat
aagaagatcgccgatgagcttttcgaccaaatggttttgttcgccgaatattgcttcaac
aagagtcactcaacggcttatggcgctgttacttatcaaactgcctatttaaaggcacat
tatccagttgcctatatggcgtcattactgacagtcaatgctggcgctagtgacaaggtg
cagcgctatatctcgaattgcaatgcgatggggattgaagtgatgccgccagatgtgaat
gcttcagggattgatttcacccctgctggtgatcgcatcttgtttggtctttctgctgtg
agaaatcttggcgatggtgcaatcaggcagctaattgccaatcgcgatggtgatggcccc
tttgtctcccttgccgatctctgtgatcgtctgccctccaatgttctgaatcgtcgcggg
ttggaatctcttattcattgcggagccctagatgccatagaccctgaatcgaaccgggcc
cagttaattgccgacttggagcttctgatcaactgggctgcttctcgtgcccgtgatcga
ctaagtggtcagggcaacctatttgatcttgtggctggagcagcagacgagcaaacgtct
gatgagctgagcactgcacccaaggcagcaccggttcccgactacccaccgactgaaaag
ctgagacttgaaaaagagttggttggtttctacctttctgatcaccctctcaagcagctc
actgctccagctcaattgctggcgcccattggtcttgccagccttgaggatcagcctgac
aaggcgaaggtcagtgtgatcacgatgctgacggagatgcgccaagtcacaacccgcaag
ggcgatcgcatggcagttctcaagattgaggatctcaccggtggttgcgaagctgtggtg
ttcccaaaaagctatgcccgtctatcagatcacctcatgttggaagcgcgactgcttatc
tgggcctctgttgatcgtcgcgacgaccgtatccaattgatcattgatgattgccgcgcc
atcgatgacctacgactgctgttggtggagttgatgcctgatgaagcctgtgacatcact
gtgcagcacaagcttcgggaatgtctccatcagcatcgcccagccaaggatgaatttggc
gtgcgggtacccgtggtggcagcggttcgccagggtccccaggtacgttacgtatgtcta
ggtcatcagttctgcgttcgtgacgcttctgctgcactcagttcccttcaacagcaggaa
ttcaaagctcgatgcagcgaccgactatttgtctga
DBGET
integrated database retrieval system
