Prochlorococcus marinus MIT 9303: P9303_19461
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Entry
P9303_19461 CDS
T00466
Symbol
trmD
Name
(GenBank) putative bifunctional enzyme: tRNA methyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K00554
tRNA (guanine37-N1)-methyltransferase [EC:
2.1.1.228
]
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
pmf
Prochlorococcus marinus MIT 9303
Pathway
pmf00900
Terpenoid backbone biosynthesis
pmf01100
Metabolic pathways
pmf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pmf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
P9303_19461 (trmD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmf03016
]
P9303_19461 (trmD)
Enzymes [BR:
pmf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.228 tRNA (guanine37-N1)-methyltransferase
P9303_19461 (trmD)
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
P9303_19461 (trmD)
Transfer RNA biogenesis [BR:
pmf03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
P9303_19461 (trmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YgbB
tRNA_m1G_MT
Hyphal_reg_CWP
Motif
Other DBs
NCBI-ProteinID:
ABM78688
UniProt:
A2CB28
LinkDB
All DBs
Position
complement(1710654..1711886)
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AA seq
410 aa
AA seq
DB search
MAPFRLDVVTLVPQAFTPLGELGVIGRAFASGIAALHTHNPRDYTTDRYHKVDDQPYGGG
AGMVLKPEPVFAAFEAIPVQSRRRVLLLTPQGKPLCQKDLHRWVVDHDQLVLICGHYEGF
DERIRGLADEEVSVGDFVLTGGELPAMTVINGVVRLLPGTVGTAESLQDESHSDVLLEHP
HYTRPANFRGMVVPDVLRSGDHGAIALWRQQQRQLRTQLRRPDLYVRWSDQQQSSTLTME
SHGSASMQFRIGNGYDIHRLVPGRPLILGGVTLDHPDGLGLDGHSDADVLVHALMDALLG
ALSLGDIGKYFPPDDPRWKGADSLMLLEQVVALVRDRGWQVLNVDAVVVAERPKLKPHIN
AMRSNLAQRLGVELDAVGVKATTNEGLGPEGREEGMSSQAVALLQQIGLT
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttttcgcctcgatgtagtgactttggtgccacaggcgtttactcctcttggt
gaactcggggtgattggtcgtgcgtttgcctctggtatcgctgccttgcacacccataat
ccccgcgattacaccacggatcgctaccacaaggttgatgatcagccttatggcggtggt
gctggcatggtgcttaagccagaaccagtctttgctgcttttgaggcgattcctgttcag
tcgcgacggcgggtgctgcttctgacccctcagggaaaaccgctatgccagaaggatttg
catcgttgggtagtggaccacgatcagcttgtgctgatctgcgggcattacgaaggtttt
gatgagcggatcagaggtttggcagatgaggaggtgtctgtaggggattttgtgctcacc
ggtggtgagctaccagcaatgacggtgatcaatggggtggtgaggttgttaccgggaact
gttggaacggcagagtcgctgcaggatgagagtcatagcgatgtcctcctcgagcatcct
cactacacaaggccagcgaattttcgcggcatggttgttccagatgtgttgcgcagtggt
gatcatggtgcgattgctctgtggcgacagcaacagcggcagctgcgtacgcagctgcgt
cgtccggatctctatgttcgctggtctgatcagcagcaatcatcaacactgacaatggag
tcccatggttctgcctccatgcagtttcgtatcggcaacggctatgacattcatcgctta
gtgcccggtcgccccttgattcttggtggcgtgacacttgatcatcccgatgggttgggg
ctcgatggtcacagcgatgctgatgttcttgttcatgcgctgatggatgccttgcttggg
gctctttcgttaggcgatatcggtaaatattttccgccggatgatccccgctggaaaggg
gccgatagcttgatgctgcttgagcaggttgtggctctggtacgagatcgcggctggcag
gttttgaatgtggatgccgtggtggtggctgagcgtcccaagctcaagcctcatatcaat
gcgatgcgcagcaacctggcacaacggttgggggtggaattggatgccgtgggtgtgaag
gccaccaccaatgaagggcttggaccggaaggtcgagaggaggggatgagtagtcaggca
gtcgcactgttgcagcagataggcctgacatga
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