Prochlorococcus marinus MIT 9303: P9303_22631
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Entry
P9303_22631 CDS
T00466
Symbol
rnd
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pmf
Prochlorococcus marinus MIT 9303
Brite
KEGG Orthology (KO) [BR:
pmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmf03016
]
P9303_22631 (rnd)
Enzymes [BR:
pmf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
P9303_22631 (rnd)
Transfer RNA biogenesis [BR:
pmf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
P9303_22631 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABM78998
UniProt:
A2CBY8
LinkDB
All DBs
Position
complement(1998849..1999487)
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AA seq
212 aa
AA seq
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MADFSKAPASFVVFDGDLDSDWANRYLRASAIAVDTEAMGLIHGRDRLCLVQICDPADNV
ACVRIGLGQTSAPRLQKLMEATSVEKVFHFARFDVAALASGLGISVLPIFCTKVASRLAR
TYSPRHGLKEVVMELVGVELDKQAQSSDWGRVEELSDVQLAYAANDARYLLPARQRLEMM
LRREGALGDCSALFQLHSCHRGTGSFAIYPDL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggccgacttttctaaagctcctgcaagctttgtcgttttcgatggggatctcgactca
gactgggcgaatcgatatctcagagcatctgctattgcggtagacactgaggccatggga
cttattcatggccgcgaccgcctctgtcttgtgcagatttgtgaccctgccgacaatgtg
gcatgcgtgcggatcggtttgggtcagacctctgcccctcgcttgcagaagctaatggag
gccacttctgttgaaaaggtgttccactttgctcgctttgatgtggccgcacttgctagc
ggattgggcatctccgttttgcccattttctgtacgaaggtggccagtcgccttgcacga
acctatagccctcgccatgggttgaaggaggtggtgatggagttggttggagttgaactg
gataagcaggcccagagcagtgattggggaagggttgaggaactcagcgatgttcagttg
gcctatgcagccaacgatgctcgatatctgcttccggctaggcaacgtctagaaatgatg
ttgcgacgtgagggggcgctgggagattgctcagcgttgtttcagctgcattcctgtcat
cgcggaactggatcgtttgcgatttacccagatctttga
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