Prochlorococcus marinus MIT 9303: P9303_23261
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Entry
P9303_23261 CDS
T00466
Symbol
rpoA
Name
(GenBank) Bacterial RNA polymerase, alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pmf
Prochlorococcus marinus MIT 9303
Pathway
pmf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P9303_23261 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmf03021
]
P9303_23261 (rpoA)
03400 DNA repair and recombination proteins [BR:
pmf03400
]
P9303_23261 (rpoA)
Enzymes [BR:
pmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P9303_23261 (rpoA)
Transcription machinery [BR:
pmf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P9303_23261 (rpoA)
DNA repair and recombination proteins [BR:
pmf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P9303_23261 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABM79061
UniProt:
A2CC51
LinkDB
All DBs
Position
2046104..2047042
Genome browser
AA seq
312 aa
AA seq
DB search
MLQYQIDRIEHQVADDRAQTGVFLIGPLERGQATTLGNSLRRVLMGGLEGSAITAVRIAG
VNHEYATIPGVREDVLDILLNCKQLSVNSRTSELEIGRLVVTGPAQVKAKDLQFSSQVQV
VDGDRQIATVHEGHSLELEVHVERGIGYRPVDRHNEDISAIDLLQIDAVFMPVRRVNFTI
DETAVAEGGSTRERLRIEIVTDGSTTPDDALAESANQLIELFQPLATVTMVEEPGLEPEP
SAESQIPLEELNLSVRAYNCLKRAQVNSVSDLMGFSYEDLLEIKNFGSKSADEVIEALER
IGISIPQSRTST
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcaataccagatcgaccggatcgagcatcaagttgccgatgatcgcgcccaaaca
ggcgttttcctcattggaccgctcgaacgcgggcaagccaccacgcttggcaattccctc
cgcagggtgctgatggggggccttgaggggagcgccatcaccgccgtgcgcattgccggt
gtcaaccacgagtatgcgaccatcccaggagtccgagaagatgtactcgacatcctgttg
aactgcaaacagctgtcggtaaacagtcgaacgagtgaactagagattgggcgacttgtg
gttaccggccctgcccaggtcaaagctaaagacctgcaattctcctcacaagtccaagtg
gtggatggagaccgccaaattgccactgtgcatgagggtcacagccttgagttagaagtt
catgttgagcgggggatcggttaccgccctgttgatcgccacaacgaagatataagcgcc
attgatctactgcagatcgatgctgtgttcatgcccgtccgtagggtgaacttcaccatc
gacgagactgccgtcgcagaaggaggatctacccgtgagaggctgcgcatagaaattgtc
accgatggttcaactacaccagatgatgcccttgcagagtcagccaaccaactgatcgaa
ctctttcagccccttgccaccgtcaccatggtggaagaaccaggcctggaacccgagcct
tccgctgaatcacagatcccccttgaagagctcaacctctctgtaagggcttacaactgc
ctcaagcgagcccaggtgaactcagtttctgacctgatgggcttcagctacgaggacctg
cttgagatcaagaacttcggctctaagtctgcagacgaggtcatcgaagccctagagcgc
atcggcatttcaattccacaaagccgtaccagcacctag
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