Prochlorococcus marinus MIT 9303: P9303_26481
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Entry
P9303_26481 CDS
T00466
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pmf
Prochlorococcus marinus MIT 9303
Pathway
pmf03030
DNA replication
pmf03430
Mismatch repair
pmf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P9303_26481 (holB)
03430 Mismatch repair
P9303_26481 (holB)
03440 Homologous recombination
P9303_26481 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmf03032
]
P9303_26481 (holB)
03400 DNA repair and recombination proteins [BR:
pmf03400
]
P9303_26481 (holB)
Enzymes [BR:
pmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P9303_26481 (holB)
DNA replication proteins [BR:
pmf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P9303_26481 (holB)
DNA repair and recombination proteins [BR:
pmf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P9303_26481 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
ABM79378
UniProt:
A2CD18
LinkDB
All DBs
Position
complement(2336713..2337693)
Genome browser
AA seq
326 aa
AA seq
DB search
MSLEIETRGLFEDLIAQPLAVALLEAALSQGRLAPAYLFSGPDGVGRSLAALRFLEGVIS
SGKPALRERRRLEAFNHPDLLWVEPTYQHQGRLVPKSQAEEEGVSRRSPPQVRLEQIRGV
TRFLGRRPVEAPRGMVVIEAADSMPEAAANALLKTLEEPGHGLLILLSAASERLLTTIRS
RCQQILFARLEGADMQTVLARTSTAEMRSSLLALDQPELVAMAAGSPGALLQHFWLWQAV
PEEFWLRLEERPQKPMEALALARDLTEALNGEQQLWLIDWWQQHFWIQRPDPRPLKRLER
LRSHLLGFVQPRLAWEVALLELIPCV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgagattgagacgcgtgggctgtttgaagatttgatcgctcagccgttggca
gttgcattgctggaggcagcgttgagtcagggtcgactggctccggcatatctcttttct
ggtccagatggagtgggtcgcagtctggcggcattgcgttttctcgagggcgtcatcagc
agtggtaagccggccctgcgtgaacgccgtcgtctagaggcgttcaaccatcctgatctg
ctttgggtcgaaccgacttatcagcatcaaggccgcctggtccctaagtcccaggcagag
gaagaaggcgtgagccgccgttcacccccacaggtgcgcctcgaacagattcggggggtg
acaagattcctaggacgacgacctgttgaggccccaaggggcatggtggtgattgaagcg
gcggactctatgcccgaagctgctgccaatgctttgcttaaaacgctggaagaaccaggt
catggcttgttgattctgctttcggccgcttctgagcgcttgctcacgacaattcgttct
cgatgccaacagattctttttgctcgtcttgaaggagcagacatgcagactgttctggcc
aggacgagcacagcggagatgcggtcgtccttgttggcattggatcagccggaactggtt
gcgatggccgctggttctcctggggcgctgttgcagcatttttggctctggcaggcagtt
ccagaggagttttggctacgccttgaagagcgtccccaaaagccaatggaagccttagct
ctggcgagggaccttactgaggctcttaatggggagcagcagctttggctgattgattgg
tggcaacaacatttttggatccaacggcctgatccaagaccactgaaacgtttggaaagg
ctgcgttcacacctgctggggtttgtgcaacccaggctggcctgggaagtggctttgctg
gaactgattccttgcgtttaa
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