Prochlorococcus marinus MIT 9301: P9301_03281
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Entry
P9301_03281 CDS
T00488
Symbol
uvrD
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmg
Prochlorococcus marinus MIT 9301
Pathway
pmg03420
Nucleotide excision repair
pmg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P9301_03281 (uvrD)
03430 Mismatch repair
P9301_03281 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmg03400
]
P9301_03281 (uvrD)
Enzymes [BR:
pmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P9301_03281 (uvrD)
DNA repair and recombination proteins [BR:
pmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P9301_03281 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
P9301_03281 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
ResIII
Viral_helicase1
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABO16951
UniProt:
A3PB26
LinkDB
All DBs
Position
complement(300518..302926)
Genome browser
AA seq
802 aa
AA seq
DB search
MHQTNNFLFNSLNNQQLQAVKHVYGPLLVVAGAGSGKTKALTHRIANLIEGNSIDPYNIL
AVTFTNKAAKEMKGRLEVLLAQELAFNQFGQPWTTLKEIDQNQLRTNVHQERLQNLWIGT
FHSLFSRLLRYDIEKYTDPEGLKWTRQFSIYDETDSQTLVKEIISQDMSLDPKRYDPKKI
KRLISNAKNQCLTSNDLLEKAENNFDKTVAEAYKRYRISLSKNNSLDFDDLLLLPVFLLR
QNDIVRDYWHKRFKHILVDEYQDTNRTQYELIKLITAGNTEPKKFFNWEDRSIFVVGDAD
QSIYSFRAADFRILIGFQEDFKTSINDDTNSSLIKLEENYRSSSNILDAANSLIENNSER
IDKVLKATKEKGELLTLLSCDDEISEAEAITNKIKSLNNYNQNPIWKNFAILYRTRAQSR
VLEESLVRWRIPYTIFGGLRFYDRREIKDAIAYLKVLVNSSDNVSLLRIINVPRRGIGKT
TIQKLNELSNRLNIPLWEVLNDKQSLEETIGRSSKGINKFTEVMNDLLCYLENSGPAQLL
QLILEKSGYLSDLLSSGTEESEDRRNNLQELINAATQYEEETESGDVEGFLSTAALTTDN
DTKKNNPNSVTLMTLHNSKGLEFQNVFITGLEQGLFPSHRSIDTPSLLEEERRLCYVGIT
RAKERVFLSHARERRLWGGMREATIPSIFLSEIPEDLIDGELPQTGGASIRRDLHLDRLT
RVDRNNPNEFVNKPINAVRKLYSGPSKGKSWIVGDKLIHSKFGKGEIIHIFGSGEKISLA
VKFGDKGSKILDPRLAPIRYVS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
gtgcatcaaaccaacaatttcctttttaattccctaaacaatcaacaactccaagcagta
aaacatgtttatggaccactattagttgtagcaggtgcaggtagcggaaaaactaaggct
cttactcacagaattgcaaaccttattgagggtaactctatagatccttataacattctc
gcagtcacattcactaacaaagctgctaaagaaatgaaaggaagattagaggttcttcta
gcccaagaattagcttttaatcaatttggtcagccttggacaactctcaaagaaattgat
caaaatcaattaagaacaaacgttcaccaagagaggcttcagaacctttggataggtact
ttccattctttattttcaagacttctgagatacgatattgaaaaatataccgatccagaa
ggcctaaaatggacaaggcaattttcaatttacgatgaaacagattctcaaacattagta
aaagaaattatcagtcaagatatgagtcttgacccaaaaagatatgatcccaaaaagatt
aaaagattaataagtaatgctaaaaatcaatgcttaacttctaatgatcttttagaaaaa
gcagaaaataattttgataaaacagttgcagaagcctacaaaagatatagaatttcgcta
tcaaaaaataattctttagactttgatgatcttctacttttgcccgttttcttattgagg
caaaatgatatagtccgtgattactggcacaaaagatttaaacatattttagttgacgaa
tatcaagatacaaatagaacacaatatgaacttataaaattaattacagctggaaatact
gaaccaaaaaaattcttcaattgggaagatcggtcaatttttgtagttggggatgctgat
caaagtatttatagtttcagagcagctgacttcagaattttaattggttttcaagaggat
tttaaaacttcaatcaacgacgatacaaattcatctttaattaaattagaagaaaattat
aggtcatcttccaatattcttgatgctgcaaactcactaattgaaaacaactctgaaaga
attgacaaagttttaaaggctactaaagaaaaaggggaacttttaacgttactcagctgt
gatgatgaaatttccgaggcagaagcaattacaaataaaattaaatcactcaataactat
aatcaaaacccaatttggaaaaattttgcaattttatatcgaaccagagctcagtcgaga
gtattagaagaatctcttgtaaggtggcgcattccttatacaatttttggaggattgcgt
ttttatgataggagagaaattaaagatgcgatagcatatttgaaagttctggttaattct
tcagataacgttagtcttttacgaatcataaatgttcctagaagagggattggtaagact
actattcaaaaacttaatgaactatccaataggttaaatattccattatgggaggttctt
aatgataagcaaagtcttgaagaaacaataggccgatcatcaaaaggaattaataaattt
actgaagttatgaatgacctactgtgttacctagaaaattcaggtcccgctcaactacta
caacttattttagaaaaaagtggttatttaagtgatttactctctagtgggactgaagaa
tctgaagatagaagaaataacttacaagaactaattaatgcagctactcaatatgaagaa
gaaacagaaagtggagatgtagagggatttctttctacagcagccttgacaactgataat
gatactaagaaaaataatcctaactctgtaactctcatgactttgcataatagtaaaggt
ttagaatttcaaaatgtttttatcactgggctagaacaaggtctcttccctagccataga
tcaatagatactccatcacttcttgaagaggaaagaagattatgctacgtaggtattact
agagctaaagagagagttttcttaagtcatgccagagaaagaagattatggggtggaatg
cgtgaagcaacaattccttcaatatttctttcggaaatacctgaagatttaatagatggc
gaattaccacaaactggtggtgcttcaattagaagagatttgcatcttgatcgtttaaca
agagttgatcgaaacaatccaaatgaatttgttaacaaaccaataaatgcagtaaggaaa
ttatattcagggccaagtaaagggaaaagctggatagttggagataagctaattcactca
aaatttgggaaaggtgaaattatacatatttttgggagtggggaaaaaatatctttggca
gtaaaatttggtgataaaggaagtaaaattctagatcccagattagctccaattcgttat
gtaagttaa
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