Prochlorococcus marinus MIT 9301: P9301_18211
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Entry
P9301_18211 CDS
T00488
Name
(GenBank) Type II alternative RNA polymerase sigma factor, sigma-70 family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pmg
Prochlorococcus marinus MIT 9301
Brite
KEGG Orthology (KO) [BR:
pmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmg03021
]
P9301_18211
Transcription machinery [BR:
pmg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P9301_18211
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ABO18444
UniProt:
A3PFB9
LinkDB
All DBs
Position
complement(1541677..1542711)
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AA seq
344 aa
AA seq
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MVLFTKHHLAFMSSETISENKLTSIASLKASNDVDLVRSYLRDIGRVPLLSHEQEITLGR
QVQEYMQVERAELEISELTGDKPSIDELSTKLNLSTSVIKKRLRAGQRAKERMVAANLRL
VVSVAKKYTKRNMELLDLIQEGTIGLVRGVEKFDPARGYKFSTYAYWWIRQGITRAIAEK
SRAIRLPIHITEMLNKLKKGQRELSQEMSRTPTVSELAKYVELPEDDVKDLMCKAGQPVS
LETKVGDGEDTVLLDLLAGGEDLPDEQIEMDCMRGDLHSLLHQLPDLQCRVLRMRYGMDG
DEPMSLTGIGRVLGISRDRVRNLERDGLRGLRRLSHNVEAYFVS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggtattgtttacaaaacatcatttagcattcatgtcctctgaaacaataagtgaaaat
aaactaacgtcaatcgcaagtttaaaagcaagtaatgatgtagatcttgttcgatcatat
ttgagggatataggaagagttcccttactatcgcatgagcaagaaattactctaggtcga
caagttcaagagtatatgcaagttgaaagagctgaattagaaatcagcgaattaacagga
gataaacccagtattgatgaattatcgacgaaattaaacttgtctacttcagtaataaaa
aaaagattgagagctggacagagagctaaagaaagaatggttgcagcaaatttaagattg
gtagtgagcgttgcaaaaaaatatacaaaaagaaatatggaacttttagatttaattcag
gagggaactataggacttgttagaggagttgaaaaatttgatccagcgagaggctacaag
ttttcaacatatgcatattggtggattagacaaggtattactagagcaatagctgaaaag
agtcgggcgattaggttgcctatccacattaccgaaatgttgaataagttaaaaaagggt
caaagagagctcagtcaagaaatgtctagaactccaactgtaagtgaacttgcgaaatac
gtagagcttccagaagatgacgttaaagacttaatgtgcaaagctgggcagccagttagt
cttgaaaccaaggtaggtgatggtgaagatactgttttactagatttacttgcagggggc
gaggatttgccagacgaacaaattgagatggattgtatgagaggtgatcttcattctctt
ttacatcaattacctgatctgcaatgtagggttttaagaatgagatacgggatggatggt
gatgagccaatgtctcttacaggtataggaagggtcctaggaataagtagagatcgagta
agaaacctagaacgtgatggtttaagaggcttgagaagacttagtcataatgtagaagct
tacttcgtttcttga
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