Prochlorococcus marinus MIT 9301: P9301_18881
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Entry
P9301_18881 CDS
T00488
Name
(GenBank) Type II alternative RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
pmg
Prochlorococcus marinus MIT 9301
Brite
KEGG Orthology (KO) [BR:
pmg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P9301_18881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmg03021
]
P9301_18881
Transcription machinery [BR:
pmg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P9301_18881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ABO18511
UniProt:
A3PFI6
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All DBs
Position
1616615..1617634
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AA seq
339 aa
AA seq
DB search
MGIPLESAKSSSDNNFDEPRLPNTAGKSRKSKSSLTAKQSQKKSGRLASDSIGYYLSSIG
RVPLLTPAEEIELAHHVQNMKKLLQIPETDRTQRNLYQIKIGKRARDRMMAANLRLVVSV
AKKYQNQGLELLDLVQEGAIGLERAVDKFDPAMGYKFSTYAYWWIRQGMTRAIDNSARTI
RLPIHISEKLSKMRRVSRELSHKFGRQPTRLEMATEMGIDQKDLEDLISQSAPCASLDAH
ARGEEDRSTLGELIPDPNCEEPMEGMDRTIQKEHLGTWLSQLNEREQKIMKLRFGLDGEE
PLTLAEIGRQINVSRERVRQLEAKAILKLRVMTTHQKAA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggggatccctctggaatctgcaaaaagctcttcagataataattttgatgagccaaga
ttaccaaacactgcgggcaagtctcgcaaatcgaaatccagtcttacggcaaaacaaagc
caaaaaaaatctggcagactcgcttcagattctattggctattacttaagtagcattgga
agagtacctcttttgactccagcagaggaaatagagttagctcatcatgttcagaacatg
aaaaagttgctacagattcctgaaactgatagaacccaacgaaatctttatcaaattaag
attggcaaaagagcaagagatagaatgatggcagctaatctaagactcgttgtctcggtt
gcaaaaaaataccaaaaccaagggcttgaattattagatcttgtccaggaaggagctatt
ggccttgaaagagctgtagataaatttgatcctgctatgggatataaattctcaacttat
gcttactggtggattagacaaggaatgacgagggcaattgataatagtgctagaacgatc
cgtttgcctattcacataagtgaaaaactgtccaaaatgagaagagtctctagagaatta
tcacataaatttggcagacaacctacaagattggaaatggcaactgagatgggaattgat
caaaaagatttagaagatttaatttctcaaagtgctccatgcgcctccctagatgcacat
gcaagaggggaagaagacagaagtactcttggtgaactcatacctgatccaaactgtgaa
gagcctatggagggtatggatagaactattcaaaaggagcatttaggaacttggctttct
caattaaatgaaagagagcaaaaaatcatgaagctaaggtttgggctagatggtgaagaa
ccattaacactcgcagaaataggaagacaaattaatgtttcacgagaaagagtaaggcaa
ctagaagctaaagcaatattaaagcttcgagtaatgacgactcatcaaaaagcagcttaa
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