Prochlorococcus marinus MIT 9215: P9215_00821
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Entry
P9215_00821 CDS
T00598
Symbol
csdB
Name
(GenBank) putative cysteine desulfurase or selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pmh
Prochlorococcus marinus MIT 9215
Pathway
pmh00450
Selenocompound metabolism
pmh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
P9215_00821 (csdB)
Enzymes [BR:
pmh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
P9215_00821 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
P9215_00821 (csdB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
SelA
zf-CCCH_UNK
Motif
Other DBs
NCBI-ProteinID:
ABV49701
UniProt:
A8G270
LinkDB
All DBs
Position
complement(81695..82936)
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AA seq
413 aa
AA seq
DB search
MKTIQNFPEITKKDFPLLKSNEQIIYLDHAATTQKPIQVLRKIDEYYRKFNANVHRGAHQ
LSAKATEEFENARFLISKYIKANSTKEIIFTRNATEAINLAARTWGESSLRENDEILLSI
MEHHSNIVPWQMVAAKNKCKLKFIGINKDGKLDLDDFKSKLTSRTKLVSLVHVSNTLGCC
NPIKEITKLAKQKGSLVLIDACQSLAHQKLDVIDLDIDFLAGSGHKLCGPTGIGFLWSRK
EILEKIPPLFGGGEMIQDVFEETSTWAELPHKFEAGTPAIAEAIGLAEAINYINTIGLNE
IHEYEKNITKYLFEKLSQIENIEIIGPSPEIDPERASLATFYIKNIHSNDIAEILDSKGI
CIRSGHHCCQPLHRHIGIKSTARVSMNFTTNKKEIDIFIEKLKDTIDFLKINS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaattcaaaattttcctgagataaccaagaaagactttcctcttttaaaaagt
aatgagcaaatcatttatttagaccatgctgcaactactcaaaaacccatacaagtctta
agaaaaattgatgaatattatagaaagtttaatgccaatgtacacagaggcgcgcatcaa
ttaagtgctaaagcaacagaagaatttgaaaatgcaaggtttttaattagtaaatatata
aaagctaattcaacaaaagaaattattttcacaagaaatgcaactgaagcaatcaattta
gcggccagaacatggggtgaatcttcattaagagaaaacgatgaaattctcttatcaata
atggagcatcacagcaatattgttccatggcaaatggttgcagcaaaaaataaatgtaaa
ttaaaatttataggtataaataaagatggaaaattagatttagacgactttaaatcaaaa
ctaacatctagaacaaagcttgttagcctagtacatgttagtaatactctaggttgctgt
aatccgatcaaagagataactaaattagctaaacaaaaaggttctttagtgttaatagat
gcatgtcaaagtttggcgcatcaaaaacttgatgtaatagatcttgatatagatttttta
gctggatcaggacataaactttgcggtcctacaggtattggtttcctctggtcaagaaaa
gaaatcctagagaaaattccacctctctttggaggtggagaaatgattcaagatgttttt
gaagagacaagtacttgggcagagctaccacataaatttgaagctgggactccagccatt
gcagaagcaataggtcttgcggaggctattaattacataaacactattggattaaatgaa
attcatgaatatgaaaaaaatattactaaatatttatttgaaaaattaagtcaaatagag
aatattgaaattataggtccatcgccggaaatagatccagagagagcctctcttgccacc
ttttatattaaaaatatacattcaaacgatattgctgaaattcttgattcaaaaggaata
tgcattagaagtgggcatcattgctgtcaacctcttcacaggcacattggaattaaatca
acagctagagttagcatgaatttcacaaccaataagaaagaaattgacatatttatagaa
aaattaaaggatactattgattttctaaaaataaattcttaa
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