Prochlorococcus marinus MIT 9215: P9215_03291
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Entry
P9215_03291 CDS
T00598
Symbol
uvrD
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmh
Prochlorococcus marinus MIT 9215
Pathway
pmh03420
Nucleotide excision repair
pmh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P9215_03291 (uvrD)
03430 Mismatch repair
P9215_03291 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmh03400
]
P9215_03291 (uvrD)
Enzymes [BR:
pmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P9215_03291 (uvrD)
DNA repair and recombination proteins [BR:
pmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P9215_03291 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
P9215_03291 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
Viral_helicase1
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABV49946
UniProt:
A8G2W5
LinkDB
All DBs
Position
complement(297825..300233)
Genome browser
AA seq
802 aa
AA seq
DB search
MPQTNNFLFKSLNNQQLQAVKHVYGPLLVVAGAGSGKTKALTHRIANLIENNSIDPYNIL
AVTFTNKAAKEMKARLEVLLAQELAFNQFGQPWTTLKEIDQNQLRTNVYQERLQNLWIGT
FHSLFSRLLRYDIEKYTDPEGLKWTRQFSIYDETDSQTLVKEIISQDMNLDPKRYDPKKI
KRLISNAKNQCLTSNDLLEKADNNFDKTVAEAYKRYRISLSKNNSLDFDDLLLLPVFLLR
QNDIVRDYWHKRFKHILVDEYQDTNRTQYELIKLITAGNTEPKKFFNWQDRSIFVVGDAD
QSIYSFRAADFRILIGFQEDFKTLINDDTKSSLIKLEENYRSSSNILDAANSLIENNSER
IDKVLKATKEKGELLTLLSCDDEISEAEAITNKIKSLNHYNQNPIWKNFAILYRTRAQSR
VIEESLVRWRIPYTIFGGLRFYDRREIKDVIAYLKVLVNSSDNVSLLRIINVPRRGIGKT
TIQKLNELSNRLNIPLWEVLNDKQSLEETVGRSSKGINKFTEIMNDLLCYLENSGPAQLL
QLILEKSGYLSDLLSSGTEESEDRRNNLQELINAATQYEEETESGDVEGFLSTAALTTDN
DTKKNDPNSVTLMTLHNSKGLEFQNVFITGLEQGLFPSHRSIDTPSLLEEERRLCYVGIT
RAKERIFLSHARERRLWGGMREATIPSIFLSEIPEDLMDGELPQTGGASIRRDWHLDRLT
RVDRNNQNEFVNKPINAVRKLYSGPSKGKSWIVGDMLIHSKFGKGEIIHIFGSGEKISLA
VKFGNKGSKILDPRLAPIRYVS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcaaaccaacaatttcctttttaagtccctaaacaatcaacaacttcaagcagta
aaacatgtttatggaccactattagttgtagcaggtgcaggtagcgggaaaactaaagct
cttacacatagaattgcaaatcttattgaaaataactctatagatccctataacattctc
gcagtaactttcactaacaaagctgctaaagaaatgaaagcaagattagaggttcttcta
gcccaagaattagcttttaatcaatttggtcagccttggacaactctcaaagaaattgat
caaaatcaattaagaacaaacgtttaccaagaaaggcttcaaaacctttggatcggtact
ttccattccttattttcaagacttctgagatacgatattgaaaaatatactgatccagaa
ggcctaaaatggacaagacaattttcaatttatgatgaaacagattctcaaacattagta
aaagaaattatcagtcaagacatgaatcttgacccaaaaagatatgatcccaagaagatc
aaaagattaataagtaatgctaaaaatcaatgcttaacttctaatgatcttttagaaaaa
gcagataataattttgataaaacagttgcagaagcctataagagatataggatttcactc
tcaaaaaataattctttagactttgatgatcttctacttttgcctgttttcttattgaga
caaaatgatatagtcagagattactggcacaaaagatttaaacatattttagttgacgaa
tatcaagatacaaatagaacacaatatgaacttataaaattaattacggctggaaatacc
gaaccaaaaaaattcttcaattggcaagataggtcaatttttgtagttggggatgctgat
caaagtatttatagtttcagagcagctgacttcagaattttaattggttttcaagaagat
tttaaaactttaatcaacgacgatacaaaatcatctttaattaaattagaagaaaattat
aggtcatcttccaatatccttgatgctgcaaactcactaattgaaaacaactctgaaaga
attgacaaagttttaaaggctactaaagaaaaaggggaacttttaacgttactcagttgt
gatgatgaaatttccgaggcagaagcaattacaaataaaataaaatcactcaatcactat
aatcaaaacccaatttggaaaaattttgcaattttatatcgaaccagagctcagtcgaga
gtaatagaagaatctcttgtaaggtggcgcattccttatacaatttttggaggattgcgt
ttttatgatagaagagaaattaaagatgtaatagcctatttgaaagttctggttaattct
tcagataacgttagtcttttacgaatcataaatgttcctagaagagggattggtaagact
actattcaaaaacttaatgaactatctaataggttaaatatcccattatgggaggttctt
aatgataagcaaagtcttgaagaaacagtaggcagatcatcaaaaggaattaataaattt
actgaaattatgaatgatctactgtgttacctagaaaattcaggtcctgctcaactacta
caacttatattagaaaaaagtggttatttaagcgacttgctctctagtgggactgaagag
tctgaagatagaagaaataatttacaagaactaattaatgcagctacacaatatgaagaa
gaaacagaaagtggagatgtagagggatttctttctacagcagccttaacaactgataat
gatacgaagaaaaatgatcctaactctgtaactctcatgactctgcataatagtaaaggt
ttagaatttcaaaatgtttttatcactgggttagaacaaggtctcttccctagccataga
tcaatagatactccctcacttcttgaagaggaaagaagattatgctatgtaggtattact
agagctaaagaaagaattttcttaagtcatgccagggaaagaagattatggggtggcatg
cgtgaagcaacaattccttcaatatttctttcggaaatacctgaagatttaatggatggc
gaattaccacaaactggtggtgcttcaattagaagagattggcatcttgatcgtttaact
agagttgatcgaaacaatcaaaatgaatttgttaacaaaccaataaatgcagtaagaaaa
ttatattcaggtcccagtaaagggaaaagctggatagttggagatatgctaattcactca
aagtttgggaaaggtgaaatcatacatatttttgggtctggggaaaaaatatctttagca
gtaaaatttggtaataaaggaagtaaaattctagatcccagattagctccaattcgttat
gtaagttaa
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