Prochlorococcus marinus MIT 9215: P9215_09451
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Entry
P9215_09451 CDS
T00598
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmh
Prochlorococcus marinus MIT 9215
Pathway
pmh03030
DNA replication
pmh03430
Mismatch repair
pmh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P9215_09451 (dnaE)
03430 Mismatch repair
P9215_09451 (dnaE)
03440 Homologous recombination
P9215_09451 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmh03032
]
P9215_09451 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmh03400
]
P9215_09451 (dnaE)
Enzymes [BR:
pmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P9215_09451 (dnaE)
DNA replication proteins [BR:
pmh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P9215_09451 (dnaE)
DNA repair and recombination proteins [BR:
pmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P9215_09451 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ABV50560
UniProt:
A8G4M9
LinkDB
All DBs
Position
817595..821092
Genome browser
AA seq
1165 aa
AA seq
DB search
MGFVPLHNHSDYSLLDGASQISKIVDRASDLGMESIALTDHGVMYGVLDLVKKCKEKNIK
PIIGNEMYVINGSIDDPQPKKEKRYHLVVLAKNYTGYKNLVKLTTISHLNGMRGRGIFSR
PCIDKSLLSKYSDGLIVSTACLGGEIPQAILKGRLDVAEDIAIWYKKIFSDDFYLEIQDH
GSIEDRIVNVELIKIGKKHQIKVIATNDAHYLSNMDVEAHDALLCVLTGKLISDEKRLRY
TGTEYIKSENEMLELFKDHIDDVSINEAVNNTVEISQKVEVFDLFGNYRMPKFPLNEDTD
SFSLLTQLSNEGLLKRLKKNNFTEVDESYKKRLSTELKIIKDMGFPDYFLVVWDYIKFAR
DNSIPVGPGRGSAAGSLVAYSLQITNIDPVEHGLLFERFLNPARKSMPDIDTDFCIDRRN
EVIDYVTNRYGEDKVAQIITFNKMTSKAVLKDVARVLDIPYGEADKLAKLIPVVRGKPYK
LNEMIDKNSPSQEFRDKYINDNRVKKWVDLALRIEGTNKTYGVHAAGVVIASDPLDELVP
LQRNNEGQIITQYSMDDIESLGLLKMDFLGLKNLTMIDKTVSLINQSTGKIINVDDLPQN
DSKTFELIGRGDLEGIFQLESSGMKQVVKDFKPNSLEDISSILALYRPGPLDAGLIPKFI
NRKNGNEKVDFPHPFIKSILTETYGIMVYQEQIMKIAQDLAGYSLGDADLLRRAMGKKKV
SEMVKHRNIFVKGSMKKGVNEKLANDLFDQMVLFAEYCFNKSHSTAYGAVTYQTAFLKAH
FPVAYMAALLSVNSGSSDKMQRYISNCYSMNIEVISPSINFSGVDFTIKNNQILFGLSAI
KNLGESAIRNIIENRNSFGIFESLSDLCDRLPSNVLNKRSLESLIHCGALDEFSNDNNRA
QLLSDLEHVIDWASSRNRDRLSGQGNLFDSKEEFSNVAFLDTQLKKVDDYSLIEKLKLEK
QLLGFYLSDHPLKHLAKPAKLISPINISQLEETKDRTKVSLVVMIPDLKQITTRKGDRMA
IVQLEDLSGSCEAIVFPKTYIRLSEFLLTDTRLLLWGTIDKKSDKTQLIIDDCREIDNLK
LLIINLESSQASDVRVQNTLRECLIKFKPDKDKCGIKIPVLAAVRKNNNVTYVKFGEQFC
VGDIQGACKLLEDKSFQVNLKSLVS
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcgttccgcttcataatcatagtgactacagcctacttgatggagccagtcaa
atttcaaaaattgtagatagagcttctgatcttggaatggagtctatagcgcttactgat
catggagttatgtatggtgttcttgatttggtcaagaagtgtaaagagaaaaatataaaa
ccaattattggtaatgaaatgtatgtgattaatggttctattgatgatcctcaacctaaa
aaagaaaaacgatatcatttggtggtgttagcaaaaaattatactggttataagaatcta
gttaagttaacaacaattagtcacctaaatggaatgagaggtcgaggcattttttctaga
ccatgtattgataaatctcttttaagcaaatatagcgatggtcttatagtctctactgct
tgtcttggtggagagatacctcaagctatcttgaaaggaagattagatgtggcagaggat
atagctatttggtataaaaaaatattttcagatgacttttatctagaaatacaagatcac
ggatctattgaggatagaattgttaatgttgaattaataaaaattgggaagaagcaccaa
ataaaagtcatcgctaccaacgacgcgcactacctatcgaatatggatgttgaagcacat
gatgctttgctttgcgtattaacaggaaaactaataagtgatgaaaaaagattgagatac
accggtacagaatatattaaaagtgaaaatgaaatgcttgaactttttaaagatcatatt
gatgatgtatcaattaatgaggcagtgaacaacacagtagaaatttctcaaaaagttgaa
gtatttgatttgtttggtaattacagaatgccaaaatttcctcttaacgaagatacagat
tcattttctctactaacgcaattatctaacgaaggtcttttaaaaagacttaaaaaaaat
aattttacggaagttgatgagagttataaaaaaagactatctaccgaattaaaaattata
aaagatatgggtttccctgattattttttagttgtttgggactatataaaatttgctagg
gacaactctattccagtagggccaggtagaggctctgctgcaggctcattagtagcctac
tctcttcaaattacaaatatagatcctgttgagcatggattgttgtttgagagattttta
aatccagcaagaaaatctatgccagatattgacacagatttttgcattgacaggagaaat
gaagttattgattatgtcactaatcgttatggagaggataaagttgcgcaaataattact
tttaataaaatgacctctaaggccgttctaaaagatgttgcaagggttttagatatacca
tatggagaggcggataaattggctaaattaataccagttgttagagggaaaccttataaa
ctaaatgaaatgattgataaaaattcccctagccaagagtttagagataaatatatcaat
gataatagggttaaaaaatgggttgatttggctttgagaattgaggggacaaacaaaaca
tatggagttcatgctgctggagttgttattgcatcagatcctcttgatgagcttgtacct
cttcaaaggaataatgaaggacagataataacccaatattctatggatgatatcgaatca
cttggattattgaaaatggatttcttgggtcttaagaatcttactatgattgataagaca
gtttctcttattaatcaatctactggaaagataataaatgttgatgatttacctcaaaat
gatagtaaaacctttgagcttattggtagaggcgatcttgaagggatttttcaacttgaa
tcttctggtatgaaacaggtcgttaaggattttaaacctaactctcttgaggatatttcc
tcaatacttgctctctatagacctggtcctcttgatgcaggccttatccctaaattcata
aatcgaaaaaatgggaacgaaaaggttgatttcccgcatccttttattaagtcaattctc
actgaaacttatggaattatggtttaccaagagcaaattatgaaaatagctcaagaccta
gcgggttattctttaggtgatgctgatttacttcgaagagcaatggggaaaaagaaagtg
tctgagatggtaaagcataggaatatttttgtaaaaggttctatgaagaaaggtgtaaat
gaaaaattagcaaatgatctgtttgatcaaatggtattattcgcagaatattgttttaac
aaaagtcactcaactgcttatggtgctgttacttatcaaactgcatttttaaaagctcat
tttcctgttgcgtatatggcagctcttttaagcgtaaattctggctctagtgacaagatg
cagagatatatttctaattgttattcaatgaatatagaagttatctcaccaagtattaat
ttttctggggttgatttcactattaaaaataatcagattttatttggactatctgcaatt
aagaatttaggtgaatctgcaataagaaatataattgaaaatcgaaatagttttggaatc
tttgagtcattatctgacttgtgcgatcgtttgccctctaatgttcttaataaaagaagt
cttgaatctttaattcattgtggagcgttagatgagttttcaaatgataataatagagct
caattattgtcagatctcgaacacgttattgattgggcgtcatcaagaaatcgtgataga
ttatccggacaaggaaatttatttgactctaaagaagaattttctaatgttgctttttta
gatacacaattgaaaaaggttgatgattattcacttattgagaagttaaagttagaaaag
cagctattaggcttttatttatctgatcatcctctaaagcatttagctaagccagcaaaa
cttatatctcctataaacatttcgcagttagaagaaacaaaagatagaaccaaggtctct
ttagttgtaatgatacccgatctaaagcaaatcacgacgagaaaaggagataggatggct
atagttcagctagaagatctttctggaagttgcgaagcaatagtttttccaaaaacctat
atcagattatcagaatttcttttgactgatactagattattgttgtggggaacgatagat
aaaaaaagtgataagactcaattaataatcgacgactgcagagaaatagataaccttaaa
ttgcttattattaatcttgaaagttctcaagcatcagatgtaagggtacaaaatactttg
agagagtgtttaattaaatttaaaccagataaagataaatgtggaattaagattccagtt
ttagctgcagtaagaaaaaataataatgttacatacgttaaatttggtgaacaattttgt
gttggagatattcaaggagcatgcaaattattagaagataaatcattccaagttaatttg
aaatctttagtttcctag
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