Prochlorococcus marinus MIT 9215: P9215_19701
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Entry
P9215_19701 CDS
T00598
Symbol
rpoD
Name
(GenBank) Type II alternative RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
pmh
Prochlorococcus marinus MIT 9215
Brite
KEGG Orthology (KO) [BR:
pmh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P9215_19701 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmh03021
]
P9215_19701 (rpoD)
Transcription machinery [BR:
pmh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P9215_19701 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ABV51583
UniProt:
A8G7K2
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All DBs
Position
1713551..1714570
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AA seq
339 aa
AA seq
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MGIPLESAKSSSDNNFDEPRLPNTAGKSRKSKSSLTAKQSQKKSGRLASDSIGYYLSSIG
RVPLLTPAEEIELAHHVQNMKKLLQIPETERTQRNLYQIKIGKRARDRMMAANLRLVVSV
AKKYQNQGLELLDLVQEGAIGLERAVDKFDPAMGYKFSTYAYWWIRQGMTRAIDNSARTI
RLPIHISEKLSKMRRVSRELSHKFGRQPTRLEMATEMGIDQKDLEDLISQSAPCASLDAH
ARGEEDRSTLGELIPDPNCEEPMEGMDRTIQKEHLGTWLSQLNEREQKIMKLRFGLDGEE
PLTLAEIGRQINVSRERVRQLEAKAILKLRVMTTHQKAA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggggatccctctggaatctgcaaagagctcttcagataataattttgatgagccaaga
ttaccaaacactgcgggcaagtctcgcaaatcaaaatccagtctaactgcaaaacaaagc
caaaaaaaatctggaagactcgcttcagattctattggctattacttaagtagcattggt
agagtacctcttttgactccagcagaagaaatagagttagctcatcatgttcagaacatg
aaaaagttgctacaaattcctgaaactgaaagaacgcaacgaaatctttatcaaattaag
attgggaaaagagccagagatagaatgatggcggctaatctaagactagttgtctccgtt
gcgaaaaaataccaaaatcaaggacttgaattattagaccttgttcaggaaggcgctatc
ggtcttgaaagagctgtagataaatttgatcctgctatgggatacaaattctcaacttat
gcttactggtggattagacaaggaatgacaagagctattgataatagtgcaagaacaatc
cgtctgcccattcacatcagtgaaaaactatccaaaatgagaagagtctctagagaatta
tcacataaatttggtagacagcctaccagattggaaatggcaactgagatgggaattgat
caaaaagatttagaagatttaatttcgcaaagtgctccatgcgcctccctagatgctcat
gcaagaggagaagaagacagaagcactctaggtgaactaatacctgatccaaactgtgaa
gagcctatggagggcatggatagaactattcaaaaagagcatttaggaacttggctttca
caattaaatgaaagagaacaaaaaatcatgaagcttagatttggcctagatggtgaagaa
ccattaacactcgcagaaattggaagacaaattaatgtttcacgagaaagagtaaggcaa
ctagaagctaaagcaatattaaaacttagagtaatgacaacacaccaaaaagcagcataa
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