Prochlorococcus marinus MIT 9312: PMT9312_0005
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Entry
PMT9312_0005 CDS
T00297
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pmi
Prochlorococcus marinus MIT 9312
Brite
KEGG Orthology (KO) [BR:
pmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmi03032
]
PMT9312_0005
03400 DNA repair and recombination proteins [BR:
pmi03400
]
PMT9312_0005
Enzymes [BR:
pmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PMT9312_0005
DNA replication proteins [BR:
pmi03032
]
Prokaryotic type
DNA Topoisomerases
PMT9312_0005
DNA repair and recombination proteins [BR:
pmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PMT9312_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2996
Motif
Other DBs
NCBI-ProteinID:
ABB49066
UniProt:
Q31DH9
LinkDB
All DBs
Position
complement(5916..8357)
Genome browser
AA seq
813 aa
AA seq
DB search
MDKKKFTSISLQEEMQRSYLEYAMSVIVGRALPDARDGLKPVQRRILFAMYELGLTPDKP
FRKCARVVGDVLGKYHPHGDQAVYDALVRLVQNFSTKYPTLDGHGNFGSVDNDPPAAMRY
TETRLAPISHKGFLEEIDSETVNFSNNFDGSQKEPDVLPAQLPFLLLNGSSGIAVGMATN
IPPHNLGEIVDGLIALINNKEVSNKKLSNIIKGPDFPTGGELIYSRAIEELYATGKGSIT
IRGVINSEAINLGKGKHKRNALIITELPFQISKAGWIEKLAELVNSSKINGISDIRDESD
RDGMRIVIELKKDSNAELVISNLYKKTTLQTNFGAIFLALIKGKPVQLNLKQYLNYFLEF
REETIRKRTNYFLKNTLEKLEILEGLSKATKNIKKIIEIIEDSENSAEAKSKLIDIFYLS
AKQANSVLDMPLKKLTNLEKNQIDEDIRKLQEKKDYFQNLLNERKLLLELLVDELLILKK
KYNVKRKTKLLKNIDQNEELETINNQILEDFINKKTKLFIDNRLYLRKMILNNYKKSFED
VNKIIDNKNIQKFICNIDKNVKIIGITYTGKVFHINWESNINNDYKLDKKIIGNIDQNKI
INFHSIKKGIKNYLCILNSDGRFKKVLFDEDMIKSNRCFSITKLKNNIKTIDSFIFSEEK
NLIILTSIGRMFKFNLSNKFLTPTTKQSQGLMLTKLLPTEKIVSCCSYQNGENIYLVSRK
GKIFCINSNEIYYANEYSLGYLNEITQLKNDYFLKILPSNHYLDIETNKNKSARLNFDKL
NFKSKKTNFLIDFLKLDDEEYIENCFQLENFLD
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaaaaattcacttctatctctctccaagaagaaatgcaacgttcttatttg
gagtatgcaatgagtgtaatagttggtcgtgctttacccgatgcaagagacggtcttaag
cctgtacaaagaagaatactttttgcaatgtatgaattaggtttaacaccagataagcca
tttagaaagtgtgccagagttgttggagatgtacttggaaaatatcatcctcatggagat
caggcagtatatgatgcattagtcaggctagttcaaaatttttcaactaaatatcctact
ctagacggccatgggaattttggatctgtagataatgatccgccagcagcaatgagatac
acagagaccagattagcaccgatatcacataaaggatttcttgaagagatagattcagaa
acagtaaatttctcaaataactttgacggttcacaaaaagaaccagatgttcttccagcc
caacttccatttttattattgaacggatcatcaggtattgcagttggaatggcaacaaac
attcccccccacaatctaggggaaatagtagatggtttaattgctctaatcaacaataaa
gaggtaagtaataaaaaactttctaatataattaaaggacctgattttcctacaggggga
gagttaatttatagtcgtgcaatagaagaactttacgccacaggaaaaggttcaatcaca
ataagaggtgtcataaattcagaagcaataaatttaggcaaaggtaaacataaaagaaat
gcattaatcattactgaacttccttttcaaatcagtaaggcaggatggattgaaaaacta
gcagaacttgttaattcaagcaaaattaatgggatctctgatattagggacgaaagtgat
agagatggaatgagaattgtaatagagttaaaaaaagattctaatgctgaacttgtaatt
tctaatttatataaaaaaactactctccaaaccaactttggtgccatttttttagcatta
ataaagggcaaacctgtccaactaaacttaaaacaatatctaaactattttcttgaattt
agagaagaaacaattagaaaaagaactaattattttctgaaaaacactcttgaaaaacta
gaaatattagaaggtttatctaaagcaacaaaaaacatcaaaaaaattatcgagattatt
gaagattcagaaaattctgctgaagccaaatcaaaattaattgatattttctacttaagt
gcaaaacaggcaaattcagttttggatatgcctctaaaaaaattaacaaatctggaaaaa
aatcaaattgatgaggatataagaaaattacaagaaaaaaaagattattttcaaaattta
ttaaatgaaagaaaattattacttgaattactagtagatgaattattaatattaaagaaa
aaatataatgttaaaagaaaaacaaaactacttaaaaatattgatcaaaatgaagaatta
gaaacaattaataatcagatattagaagactttatcaataaaaaaactaaattatttata
gacaacagattatatttaagaaagatgattttaaataattataaaaaatcgtttgaagat
gtaaataaaattatagataataaaaacattcaaaaattcatatgtaatatcgataaaaat
gtaaaaataattgggatcacatatacaggaaaagtttttcatattaattgggagtcaaat
attaataatgactataaattagataaaaaaatcattgggaatattgatcaaaataaaata
ataaattttcattcaataaaaaagggaattaaaaattatttatgtatcttaaattcagat
ggaagatttaaaaaagttttgtttgatgaagatatgattaaaagtaatagatgtttctca
ataacaaaattaaaaaataatattaaaacaattgattcatttatttttagtgaagaaaaa
aatttaataatattaacctcaataggaagaatgtttaaatttaatttatcaaacaaattt
ttaaccccgactactaaacaatcgcaaggattaatgcttacaaaacttttaccaactgaa
aaaattgtatcttgttgttcatatcaaaatggagaaaatatttacttagtttctagaaaa
gggaaaatcttttgtataaatagtaatgaaatttattatgccaatgaatacagtttagga
tatttaaatgaaattactcaacttaaaaacgattacttcctaaaaattttgccgagtaac
cattaccttgatattgaaactaataaaaataaatctgctaggttaaattttgataaattg
aattttaaatctaagaaaacaaattttttaattgactttttaaaattagacgatgaggaa
tatattgaaaattgttttcaactcgaaaactttcttgactaa
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