KEGG   Prochlorococcus marinus MIT 9312: PMT9312_0732
Entry
PMT9312_0732      CDS       T00297                                 
Name
(GenBank) DEAD/DEAH box helicase-like protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pmi  Prochlorococcus marinus MIT 9312
Brite
KEGG Orthology (KO) [BR:pmi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmi03400]
    PMT9312_0732
Enzymes [BR:pmi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PMT9312_0732
    5.6.2.6  RNA 3'-5' helicase
     PMT9312_0732
DNA repair and recombination proteins [BR:pmi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PMT9312_0732
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2 AAA_11
Other DBs
NCBI-ProteinID: ABB49792
UniProt: Q31BF3
LinkDB
Position
complement(682628..685114)
AA seq 828 aa
MNNIKQNSRQSNSISKIKQFFFSNGWEPLTYQEESWKAFLNGENGLIQVPTGCGKTYASL
MGPLSQLEDPKNNKSVQILLITPLKALSRDLKNSVQLAALHFNKEITVEIRNGDTTPYEK
KKQLAKPPNILITTPESLSLLLSNKGSNNLFKELSSIIIDEWHELMGSKRGNQCELSLSW
LRGNIKNLQIWAMSATIGNIEEAARAIVGMSAIKPKIISTNIQKEIEIISVLPEEETTFP
WSGHLGIRSHSSLLKILDKNKSTLLFTNTRNQSERWYQCLKFFLPEMEDKIALHHGSLDK
EDRKKVEEGVKDGLIKWVVCTSSLDLGVDFQPVDQIVQIGSAKNLARLIQRAGRSAHRPG
GKSKIIFMPTNSLELFEISAMRRIIKSGISEEIRLPELSYDVLLQHLISLACGNGFDPKI
EKERIKSCWSYRNLKDQDWDWCLDFLEYGGKCLKAYPKYKKIIKEESQNNNVNFKYFVKD
KSLIRMHKFNIGTITSDKFVNVKYMKGKSLGNLEENFASKLNPGDTFYFAGKMLQFVRIR
DMILYVKKSTKKSSLIPAWVGGQMAISDLLCESLRKEIDICNEPENYDCSNPELNSLRPI
LKKQKVLSNIPKKDEFLIEIYKTKDLSTIFVFTLDGKFVNEGIAFLWALRLAKLKQSTFS
ITANDFGFSLTSSEDYDFSIIKKEADYFFDNKKLEEDLENAINFSELTKRRFKHIAQISG
LVNQNNPTKTKTSSQLQISSSLFYDVFTKYEEGHLLIKQSHQEVKEYQLENKRISRSLER
LKNLKMLLNEIKTPTPFAFPLLVERLKNTLSNEPIERRVEKLIKKYSD
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgaataatattaaacaaaatagtaggcaaagtaattctatttctaaaattaaacagttt
ttcttctcaaatggatgggagccattaacctaccaagaagaatcttggaaagcattttta
aatggggaaaacggactaatacaagttcctactggatgcggcaaaacttacgcttcatta
atgggacctttatcacagttagaagatcccaaaaataataaaagtgtgcaaatattatta
ataacgcctttaaaagcactaagtagagatctaaaaaattccgtccaattagcagcttta
cattttaataaagaaatcactgttgaaatcaggaatggggatacaaccccatatgaaaag
aaaaagcaactagctaaaccacctaatattcttatcacgactccagagtctttatctctt
ttactttctaataaaggatctaataatctgtttaaggagttgtcatcaataattattgac
gaatggcatgaattgatgggtagtaaaagaggaaaccagtgcgagttatctttaagttgg
ctaagaggtaatattaaaaatttacaaatttgggcaatgtctgcaactattggaaatatt
gaagaagcagcaagagcaatagttggtatgagcgctataaaacccaaaattataagtaca
aatattcaaaaagagatagaaattataagcgttttaccagaggaggaaacgacctttcca
tggagtggccatctaggaataagaagtcattcttcacttttaaaaatcctagataaaaat
aaaagcaccctattattcaccaatacaagaaatcaatctgaaagatggtatcaatgtctt
aaattttttctgccagagatggaagacaaaatcgcacttcatcacggctccctcgataaa
gaagatagaaaaaaagttgaagaaggggttaaagacggattaataaaatgggtagtctgc
accagctcgctagatttgggagttgacttccaacctgtagatcaaatagttcaaattggt
agtgcaaagaatttagctagacttatccaaagagcgggaagaagtgctcatagaccaggc
gggaaatcaaaaataatttttatgcctaccaattctttggagttatttgagattagtgca
atgagaagaataataaaaagtggtatatctgaggaaattagacttcctgaattatcttat
gatgtacttcttcaacatctaataagtttggcatgcggaaatggctttgatccgaaaatt
gagaaagaaagaattaaaagttgttggagttatagaaacttaaaagatcaagattgggat
tggtgtcttgactttttagaatatggaggaaaatgtcttaaagcatacccaaaatataaa
aagataattaaagaagaatcacaaaataataatgtaaactttaaatattttgtaaaagac
aaatctttaataagaatgcataagttcaatattgggacaattacgagcgacaaatttgtg
aatgtaaaatatatgaaaggtaaatccttgggaaatttagaagagaattttgcctcaaaa
ttaaatcctggagataccttttactttgccggtaaaatgcttcaatttgtaagaatcaga
gatatgattttatacgttaaaaaatctacaaaaaaaagttctctaattcctgcatgggtt
ggaggtcaaatggcaatttctgatctactttgtgaaagtttgagaaaagaaatagatata
tgcaatgaaccagaaaattatgattgctcgaatcctgaactaaattcattacgcccaata
ttgaagaaacaaaaggttctttcaaatattccaaagaaagatgaattccttatagaaata
tataaaaccaaggatttatcaactatttttgtttttacacttgatggcaaatttgtaaat
gaaggaattgcatttctatgggctttaagattagcaaaattaaaacaatctacatttagt
attactgctaatgattttggattcagcttaactagctcagaagattatgatttttccata
attaaaaaagaagctgattatttttttgataacaaaaaattagaggaagatctagaaaat
gcaataaatttttcagaattgacaaaacgtagatttaaacatattgcccagataagtgga
ctagtaaatcaaaataatccaaccaaaacaaaaacttcttctcaacttcaaataagttca
agtcttttctacgatgtctttactaaatatgaagaaggccatcttttgataaaacaatcg
catcaagaagttaaagaatatcaattagaaaataaaagaatatctagatcattagaaaga
ttaaagaatttaaaaatgctattaaacgagataaaaactccaactccttttgctttccct
ttattagttgaaagacttaaaaataccttaagcaatgaaccaatagaaagaagagtagaa
aaacttataaaaaaatatagtgattaa

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