Prochlorococcus marinus MIT 9312: PMT9312_1385
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Entry
PMT9312_1385 CDS
T00297
Name
(GenBank) type II alternative RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
pmi
Prochlorococcus marinus MIT 9312
Brite
KEGG Orthology (KO) [BR:
pmi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PMT9312_1385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmi03021
]
PMT9312_1385
Transcription machinery [BR:
pmi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PMT9312_1385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ABB50445
UniProt:
Q319K0
LinkDB
All DBs
Position
complement(1299429..1300370)
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AA seq
313 aa
AA seq
DB search
MVSTLGVPAEPPKRRGNDPISWYLQNIGRVPLLTPAEEIELGNQVQKMMILTEDGQLNEK
IKEFTTQQKRIIKIGRRAKERMMKANLRLVVSVAKKYQGKGLELLDLVQEGSLGLERAVE
KFDPTRGYKFSTYAFWWIRQSMTRAIACQSRTIRLPVHLSERLAAIRKVSRELAHKLGAM
PSRIEIAEAMDIDVEELDSVLRQALSTSSLDAPVNGDDGRSFLGDLIADSNTEEPLDKVE
QKMHQEQLGKWLSHLSEQEQHVLKLRFGLDGNERHTLAEIGRLLEVSRERVRQVELKALR
KLRNLTRKLPSGI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaacattaggagttccagcagaaccaccaaagagaagaggtaatgatccgata
agctggtatttgcaaaatatcggtagggttcctttgttaactcctgctgaagagattgaa
ttgggcaatcaagttcagaaaatgatgattctcaccgaggatggtcaattaaatgaaaaa
attaaagaatttacaacgcagcaaaaaagaataataaaaattggtagaagagctaaagag
agaatgatgaaagctaatttaagattagttgtcagtgtcgcaaaaaaatatcagggcaaa
ggactcgaacttcttgatttagttcaagaaggatctcttggtttggagagggctgttgaa
aaatttgatcctacaagaggatataagttttctacttacgctttttggtggatccgacaa
agtatgacaagagcaattgcttgtcaatcaagaacaatccgtttaccagttcatttaagc
gaaagattagccgctatacgaaaagttagtagggaattagctcacaaacttggtgcgatg
ccaagcagaattgaaattgcagaagcaatggatattgatgttgaagaattagattctgtc
ttaagacaagctttatcaacaagtagtttagatgctccagttaatggtgatgatggcagg
agctttttaggtgatttaatagcagatagtaatactgaagagcctttagataaagttgaa
cagaaaatgcatcaagaacaacttgggaagtggttaagccatctaagcgagcaagagcaa
catgttcttaaattaaggtttgggctagatgggaatgaaagacatactcttgctgaaata
ggaagattattagaagtttctagggaaagagttagacaagttgaactaaaggcattaaga
aaattaagaaatttaaccagaaaattacccagtgggatttaa
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