Prochlorococcus marinus MIT 9312: PMT9312_1628
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Entry
PMT9312_1628 CDS
T00297
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pmi
Prochlorococcus marinus MIT 9312
Pathway
pmi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PMT9312_1628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmi03021
]
PMT9312_1628
03400 DNA repair and recombination proteins [BR:
pmi03400
]
PMT9312_1628
Enzymes [BR:
pmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PMT9312_1628
Transcription machinery [BR:
pmi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PMT9312_1628
DNA repair and recombination proteins [BR:
pmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PMT9312_1628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ABB50688
UniProt:
Q318K7
LinkDB
All DBs
Position
complement(1526249..1527184)
Genome browser
AA seq
311 aa
AA seq
DB search
MQYQIERIDHQIADDRSQTGTFLIGPLERGQATTLGNSLRRVLMGGLEGSAVTAVRIAGI
NHEYATIPGVREDVLDILLNCKQLSINSSNPELEIGRLVASGPLDVKANDIQFSSQVEIV
DGEKPIATIQEGHNLELEIHVERGVGYRPVDRKNQETTAIDLLQIDAVFMPVKRVNFSID
ETAVAEGGTGRERLKMEVVTDGSTSPDDAIAEAANQLIELFQPLATVTMVEEIPEEPEPS
PEAQIPLEELNLSVRAYNCLKRAQVNSVSDLMGFSYEDLLEIKNFGSKSADEVIEALERI
GISIPQSRTSV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgcaataccagattgaaagaatcgatcatcaaatagcagatgatcgctcccaaacagga
acttttttaattggccctttagaaaggggacaagctacaactttgggtaattctcttaga
agagtccttatgggaggacttgaagggagtgcagttactgcagtaagaatagcaggaata
aatcacgaatatgccactatccctggagttagagaagacgttttagacattcttctcaat
tgtaagcaattatcaattaatagttctaatccagagcttgaaattggcaggttagtagca
agcggtcccttggatgtgaaggcgaacgatattcaattttcctctcaagttgaaattgtt
gatggcgaaaaaccgattgcgactattcaagagggtcataacctagagttggaaatccat
gttgaaagaggtgttggatatagacctgttgatcgtaagaatcaggagacaactgctatt
gatttacttcaaatagatgctgtatttatgccagtaaagagagttaatttttcaattgat
gaaactgctgtagcagagggtggaacaggtagagaaagattaaaaatggaagtagtaaca
gatggctcaacaagccctgatgatgctatcgctgaagctgcaaaccagttaatagaactc
tttcaacctcttgcgactgttacaatggttgaggaaattcctgaagaaccggaaccatct
cctgaagctcaaattcctcttgaggaactaaacttgtccgttagagcatataattgttta
aaaagagctcaagttaactcagtttcggacttaatgggttttagttatgaagatcttctt
gaaattaagaactttggctcaaaatctgcggatgaggttattgaagctcttgagcgtata
ggaatttctattccacaaagcagaacctctgtttaa
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