Proteus mirabilis BB2000: BB2000_1331
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Entry
BB2000_1331 CDS
T02789
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pmib
Proteus mirabilis BB2000
Brite
KEGG Orthology (KO) [BR:
pmib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmib03016
]
BB2000_1331 (rnb)
Enzymes [BR:
pmib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BB2000_1331 (rnb)
Transfer RNA biogenesis [BR:
pmib03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BB2000_1331 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
AGS59824
LinkDB
All DBs
Position
1471783..1473726
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AA seq
647 aa
AA seq
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MFQDNPLLAQLKQQLHAQTPRVEGLVKGTDKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
IAAVHTNNDKESAEPEELVEPFLTRFVGRVQKKEGDNRLWIIPDHPLLKDAIPCRPIKSL
THPFADQDWAVAEMRRHPLKGDKHFQAELTDFITDKDDHFAPWWVTLMRHQLERNAPEVD
SETLTLHDDLPREDLTALSFVTIDSASTEDMDDALYIRKEENGQLSLYIAIADPTAYIQP
NSELDTIAAQRALTNYLPGFNIPMLPRELSDNLCSLRPNEKRPALVCQVGIMEDGALTDE
IHFYSAWVESKAKLVYDNISDWLEGEETQWAPENEIVHEQVMLLKEMSEKRHIWREQHAL
VFKERPDYRFILDDSGNVLDIVAEKRRTANRIVEEAMITANICAAKVLSRNLGFGIYNVH
TGFDPLYIDQVSQTLKEHGIETNADELLTLEGFCRLRRELDNQPNQFLDSRIRRFQNFAE
IKTEPGPHFGLGLEAYATWTSPIRKYSDILNHRLLKAIISKSAAEKPQDEDCVRIAERRR
ANRMAERDVGDWLYARFLKPFAGTESTFNAEIIDITRGGIRVRLVENGAIAFIPAPFLHA
VRDEIQCSQETGSVIIKGETAYKLNDIIPVRIEDVKLETRNIVARPI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaatccgctgcttgctcagctaaaacagcaactccatgcccaaacaccg
cgcgtggaaggccttgtaaaagggacagataaaggctttggcttccttgaagttgatggt
cagaaaagctattttatccctcctcctcaaatgaaaaaagtgatgcacggtgatcgcatt
atcgctgccgtacatactaataatgataaagagtccgctgagcctgaagagctggtagaa
ccctttttgactcgctttgtcggccgtgttcagaaaaaagaaggtgataatcgtctatgg
attattcctgatcaccctctactcaaagatgccattccttgtcgtcctataaaaagctta
acgcatccatttgccgatcaagattgggcagtggcggaaatgcgccgacaccctcttaaa
ggtgataaacattttcaagctgaattaactgattttattaccgataaagatgaccatttt
gcaccttggtgggtgacattaatgcgtcatcaattagagcgaaatgcacctgaagtagac
agtgaaacattaaccttacatgatgatctaccgcgtgaagatttaactgcgctctccttt
gtgaccatcgatagtgcttcaaccgaagatatggacgatgcgttatatattcgtaaagaa
gaaaatggtcaactttcactgtatatcgctattgccgatccaacggcttatattcagcct
aatagtgaattagataccatcgcagcacaacgagcgctaacaaactatctaccgggcttt
aatatcccgatgttacctcgtgagctatcagataatctctgctcattgcgccctaatgaa
aaacgccctgcgttagtctgccaagtgggtatcatggaggatggtgcattaaccgatgag
atccacttctactcagcatgggtagaatcaaaagcaaaactggtttatgacaatatttct
gattggctagaaggtgaagaaacacagtgggcacctgaaaatgagattgttcatgaacaa
gtcatgctattaaaagagatgagcgagaaacgtcatatatggcgtgaacaacatgctctc
gtctttaaagagcgtccggactatcgctttattcttgatgacagtggcaacgtattagat
atcgtggcggaaaaacgtcgtactgccaaccgtatcgtggaagaagcgatgatcaccgcc
aatatttgtgcggcaaaggtacttagtcgtaatctcggttttggtatttataacgttcat
actggttttgatccgctctatattgatcaagtctcacaaaccttaaaagagcacggtatt
gaaactaatgcagatgagttattaacccttgaaggtttctgtcgcttacgtcgtgaactg
gataatcagccaaaccaattccttgatagccgtattcgtcgtttccaaaacttcgctgaa
ataaaaacagagccaggccctcactttggtttaggccttgaagcttatgcgacatggaca
tcaccgatccgtaaatacagtgatattttaaatcaccgtttattaaaagcgattatcagc
aaaagtgcggcagaaaaaccgcaagatgaagattgtgttcgtattgccgaacgtcgtcgt
gctaaccgtatggccgagcgcgatgtcggtgattggttatatgcgcgcttcttaaaacct
tttgctggcactgagagtacctttaatgccgaaattattgatattactcgtggtggtatt
cgggtacgtttagttgaaaatggggctattgcctttattcctgcaccatttttacatgca
gtacgtgacgaaattcaatgtagtcaagaaactggctctgtcattattaaaggtgaaaca
gcctataagcttaatgacattattccggtacgtattgaagatgtgaaactagaaacgcgt
aatattgttgctcgtccgatttaa
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