Proteus mirabilis BB2000: BB2000_1353
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Entry
BB2000_1353 CDS
T02789
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmib
Proteus mirabilis BB2000
Brite
KEGG Orthology (KO) [BR:
pmib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmib03032
]
BB2000_1353 (topA)
03400 DNA repair and recombination proteins [BR:
pmib03400
]
BB2000_1353 (topA)
Enzymes [BR:
pmib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BB2000_1353 (topA)
DNA replication proteins [BR:
pmib03032
]
Prokaryotic type
DNA Topoisomerases
BB2000_1353 (topA)
DNA repair and recombination proteins [BR:
pmib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BB2000_1353 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
CK_II_beta
DUF2399
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AGS59846
LinkDB
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Position
complement(1493014..1495611)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPKSGSGSQKSENSSATKGVKKVK
KDEKSALVSRMGVDPYNGWHANYQILPGKEKVVAELKALAEKADHIYLATDLDREGEAIA
WHLREVIGGEDDRFSRVVFNEITKNAITQAFQTPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKVARGLSAGRVQSVAVRLLVEREREIKAFVPEEYWQLHASLLTPDEQPLRMEVTH
YQDNAFKPVSSEETQVAVKALQNATFIVKNREDRPTSSKPSAPLITSTLQQAASTRLSFG
VKKTMMLAQRLYEAGYITYMRTDSTNLSQDAIQMARDYIHDKFGAKYLPKEPNVYSSKEN
SQEAHEAIRPSDINVTAESLKDMDSDAKRLYQLIWDQFVACQMTPAKYDSTTLTVASGDY
KLRAKGRTLRFAGWTKVMPAMRSKDEDKTLPAVDVGAQLALAELSPTQHFTKPPARFSEA
TLVKELEKRGIGRPSTYASIISTIQDRGYVKVENRRFYAEKMGEIVTDRLEENFSDLMNY
DFTAQMEDHLDHVANNQENWKAVLDAFFTDFSQQLEVAEKDPEEGGMRPNPMVITSIECP
TCSRHMGIRTATTGVFLGCSGYALPPKERCKQTINLIPEDELLNILEGDDAETNALRARR
RCPKCGTAMDSYLIDTHRKLHVCGNNPACDGYEVEEGEFRLKGYEGPVIECDKCGAEMHL
KMGRFGKYMGCTNEECKNTRKILKSGEIAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIF
LAANTFPKSRETRAPKVAELVRFKDRLSEKMRYLAQAPVTDPEGNPTIVRFSRKTKQQYV
SSEKEGKATGWSAFYIDGKWVEKSK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgttatcgtggagtccccggctaaagccaaaacaatcaataaatat
cttggcaatgactacgtagtaaaatctagcgtgggtcacattcgtgatttgccaaaaagt
ggttctggcagccagaagagcgaaaactcatccgccacgaaaggcgtgaaaaaggttaaa
aaggatgagaaatcagccttagtcagccgtatgggtgtcgatccttataatggttggcat
gcaaactaccaaattctgccgggtaaagagaaggtagtcgctgaactaaaagcattggct
gaaaaagcagatcatatctatctcgcaacggaccttgaccgcgaaggagaagctatcgcg
tggcatttacgcgaagtgatcggcggtgaagatgatagatttagtcgtgtcgtatttaat
gaaattacgaaaaatgccattacacaagcattccaaactccgggtgagctgaatattgac
cgtgttaacgcgcaacaagcacgtcgttttatggatcgtgtggttggctatatggtttct
ccgctgttatggaaaaaagtggcgcgtggtttatctgcggggcgtgtacagtcagttgcg
gtacgcctactcgtcgagcgtgaacgtgaaattaaagcatttgtgccagaagagtattgg
caattacacgcttcactgctgacacccgatgaacaacccttgcgtatggaagtgacgcac
tatcaagataacgcctttaaaccagtctcctctgaggaaactcaggtggcggttaaggcg
ttacagaatgccactttcatcgttaaaaaccgtgaagatagaccaacatccagtaaacca
agtgcccctttgatcacctctacattgcaacaagcggcaagtactcgcttaagctttggg
gtgaaaaagaccatgatgttggctcaacgtctttatgaagcaggttatatcacctatatg
cgtactgactctaccaacctgagtcaggatgcaatccaaatggcacgtgattatattcac
gataaatttggtgcaaaatatctgcctaaagagccgaatgtttattcaagtaaagagaac
tcacaagaagcgcacgaagctattcgtccttctgatatcaatgtgacggctgaatcttta
aaagatatggatagcgacgcgaagcgtttatatcaactgatttgggatcaatttgtcgcc
tgtcaaatgactccggcaaaatatgactcaaccacacttacggttgcatcaggggattat
aaactacgcgctaaaggtcgcacattacgttttgcgggttggacaaaagtcatgccagca
atgcgcagtaaagatgaagataaaacattaccagcggttgatgtcggggcgcaattagcg
ttagctgagttatcgccaacgcaacactttactaagccaccagcgcgttttagtgaagcg
acattagttaaagagctagaaaaacgaggtattggtcgaccttcaacttatgcttcaatt
atctctaccattcaagatagaggttatgtcaaagttgaaaaccgtcgtttctatgcagaa
aaaatgggtgagattgttaccgatcgcttagaagaaaactttagtgatttgatgaactac
gatttcacggctcaaatggaagatcatctcgaccatgttgccaacaaccaagaaaactgg
aaagcggtattagatgcattcttcacagattttagtcagcaactagaagttgctgaaaaa
gatccagaagaaggaggaatgcgacctaaccctatggttattacttctattgaatgtcct
acttgttcccgtcatatgggaattagaacagcgacgacaggggtattcttagggtgctca
ggctatgctttaccaccaaaagagcgttgtaaacaaacgataaatcttattcctgaagat
gaattacttaatatcttggaaggagatgatgcggaaactaatgcattacgtgcccgtcgt
cgttgtccgaaatgcggtacggcaatggatagttatcttattgatactcatcgtaaatta
catgtttgtggtaataatcctgcatgtgatggttatgaagttgaagaaggtgaattccgc
ttaaaaggttatgaaggcccagtgattgagtgtgataaatgtggcgctgaaatgcatcta
aaaatgggtcgttttggcaagtacatgggttgcaccaatgaagagtgtaaaaatacacgt
aagatcttaaagagtggtgaaattgcaccaccaaaagaagatccggttccactacctgaa
ttgccttgtgaaaaatcggatgcttactttgtgttacgtgatggcgcggcgggtattttc
cttgcggccaatacgttccctaaatcaagggaaacccgtgcaccgaaagtcgctgagtta
gtacgttttaaagatagattatcggaaaaaatgcgctacttagcacaagcaccggtgacc
gatcctgaagggaatccaaccatagtacgttttagtcgtaaaactaaacagcaatatgtc
tcttctgaaaaagaggggaaagcaacaggttggtcagccttttatattgatggcaaatgg
gttgaaaaaagtaaatag
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