Proteus mirabilis BB2000: BB2000_2013
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Entry
BB2000_2013 CDS
T02789
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pmib
Proteus mirabilis BB2000
Brite
KEGG Orthology (KO) [BR:
pmib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmib03009
]
BB2000_2013 (srmB)
Enzymes [BR:
pmib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BB2000_2013 (srmB)
Ribosome biogenesis [BR:
pmib03009
]
Prokaryotic type
rRNA helicases
BB2000_2013 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Shikimate_DH
AAA_22
Cas3-like_C_2
AAA_11
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AGS60479
LinkDB
All DBs
Position
2168269..2169624
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AA seq
451 aa
AA seq
DB search
MTATTFSSLELDESLLTALEEKGYQRPTAIQAEAIPAAMEGRDILGSAPTGTGKTAAFLL
PAIQHLLDYPRKKSGPPRVLILTPTRELAMQVADQAKELCAHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVEMLILDEADRMLDMGFANDIETIAGETRW
RKQTLLFSATLEGNAVIDFAQRILNEPVELNADPSRRERKKIQQFYYHADNLDHKTALLA
HLLKQEEVKKSIVFVRKRERVRELAAALEKQGIKASYLEGEMAQTQRNEAIKRVESGKMH
VLIATDVASRGLDLEDITHVFNFDLPRTADVYLHRIGRTGRAGRKGTAISLVEAHDYPLL
GKISRYIQEPIKYRVVAQLRPVTKAPSQKASFKPSKKVLAKRKAKKVEEKKNVKEKVRAR
DRKNIGKRRKTATDKTTITAEKTNHIKTEQQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgacattttccagtcttgaacttgatgaaagtttattgaccgcattagaa
gaaaaaggatatcaacgtcctactgctatccaagcagaagctatccctgccgcaatggaa
ggacgtgatatattaggctctgcaccaacgggtacagggaaaacagcggcattcttactt
cctgctattcaacatttacttgattatccacgaaaaaaatcagggccacctcgtgttctg
atcttaaccccaacccgtgaacttgctatgcaagtcgctgatcaagcaaaagaattatgc
gctcatacccatctagacatcgccactatcaccggcggtgttgcttatatgaatcacgca
gaagtttttagtgagaaccaagatattgttgttgccacaacaggtcgcttattgcagtac
atcaaagaagagaactttgactgtcgtgctgttgaaatgctgatcctcgatgaagcagat
cgtatgttagatatgggttttgctaacgacattgaaactattgcaggggaaactcgttgg
cgtaaacaaacattactcttttcagccacattagaaggcaatgctgtgattgattttgca
cagcgaattcttaatgaaccggttgaactgaatgctgacccttcacgtcgtgagcgtaaa
aaaattcaacaattttactatcatgcagataatcttgaccataaaactgccttacttgca
catttactcaaacaagaagaagttaaaaaatcgattgtttttgtacgtaaaagagagcga
gtcagagagttagccgcagcattagaaaaacaaggtatcaaagccagctaccttgaaggc
gaaatggctcaaacacaacgtaacgaagcgattaaacgtgtagagtctggcaaaatgcat
gtgctgattgcgacagatgtggcgtctcgaggtcttgatttagaagatatcacccacgtc
tttaactttgacttaccgcgcacagctgatgtttatttgcaccgtattggccgtacaggt
cgagcgggtcgtaaagggactgccatttcattagttgaagcacacgattatccgctactt
ggtaaaattagccgttatatccaagagccgattaaatatcgtgttgtagcccaattacgt
ccagtgactaaagcccctagtcaaaaagcatcatttaagccttctaaaaaagtattagca
aaacgcaaagcgaaaaaagtagaagagaaaaaaaacgttaaagagaaagtacgcgcacgc
gatcgtaaaaatattggtaaacgccgtaaaaccgctactgataaaaccaccatcactgcg
gaaaaaactaatcatataaaaacagagcaacaataa
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