Proteus mirabilis BB2000: BB2000_2083
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Entry
BB2000_2083 CDS
T02789
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pmib
Proteus mirabilis BB2000
Pathway
pmib03410
Base excision repair
pmib03430
Mismatch repair
pmib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BB2000_2083 (recJ)
03430 Mismatch repair
BB2000_2083 (recJ)
03440 Homologous recombination
BB2000_2083 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmib03400
]
BB2000_2083 (recJ)
DNA repair and recombination proteins [BR:
pmib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BB2000_2083 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BB2000_2083 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BB2000_2083 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AGS60548
LinkDB
All DBs
Position
complement(2244090..2245823)
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AA seq
577 aa
AA seq
DB search
MVTIEPTLRRRVAKATALPESLDPLLRQIYANRGITSETQLERSLKGLLHYQDLNGIDVA
ISLLVEALKLQSRIVIVGDFDADGATSTALAIKALRQMGFQQVSYHIPNRFDDGYGLSPQ
VVHDVAKKGVDLIITVDNGISSFEGVDVAHEYGIRVLVTDHHLPGHSLPQADAIINPNLA
DCAFLSKSLAGVGVTFYLMTALRAELEKQGWFTTQGLARPNMADYLDLVALGTVADVVPL
DENNRIFVYEGLRRIRAGRCCAGIKALTEVSRKTLSQLVSSDLGFALGPRLNAAGRLDDM
SVGVALLLTNDIGVAREIANELDGLNQTRREIEAGMQEEASTIFRQFITTQDDLPNGLAI
YHPQWHQGVVGILASRIKEKLHRPVIAFAPSGDGLLKGSGRSIHGVHLRDALERLNTLNP
GLMVKFGGHAMAAGLSLEEEKFPLFQRHFSALMAELVSAEQLQGVILTDGELSDSQLSLP
IAEMLREAGPWGQAFPEPLFDGKFSLLQQRIVGSKHLKMMLQPINSHVMIDAIAFNVDVN
IWPDNSIKTVELAYRLDVNEFRGQRNAQLLVEHIWPC
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggttactattgaaccgacattacgtcggcgtgtggcgaaagcaacagcattaccagaa
agcctcgatcccttattacggcaaatttatgccaatcgaggtattacctctgaaactcag
ctcgagcgctcgttaaagggcttattgcattatcaagatttaaacggtattgatgttgct
atctctttattagttgaggcattaaagctgcaatcgcggatcgttattgtaggggatttt
gatgccgatggggcaaccagtacagctcttgctattaaagcgttacggcaaatgggattt
cagcaagtaagttaccatattcctaatcgttttgatgacggttatggacttagccctcaa
gtggttcatgatgtggcgaagaaaggcgtagatctgattattacggttgataatgggatc
tcctcttttgaaggtgttgatgttgctcatgaatatggtattcgtgtattggttactgat
caccatttgccgggtcactcccttcctcaagctgatgcaattatcaatcctaatttagcg
gattgtgcctttttgtcgaaatcattagcgggtgtcggtgtcactttctatttaatgacc
gcattaagagctgaattagaaaaacaaggttggtttacaacacagggattagctcgcccc
aatatggccgattaccttgatttagtcgcattaggcacggttgctgatgtggttcctctt
gatgaaaataatcgtatttttgtttatgagggattacgccgtattcgtgcaggacgttgc
tgcgcagggatcaaagccttgacggaagtttcacgtaaaacgttgtcacaattagtcagt
agtgacttaggttttgcattagggccaagacttaatgcggctgggcgtcttgatgatatg
tctgttggcgttgctttactgttaactaatgatattggtgtcgcccgtgaaattgccaat
gaactggatggattaaatcagactcgtcgtgaaatagaagcaggaatgcaagaagaagca
tcgacaatttttcgccaatttattactacccaagatgacttaccgaatggattagctatt
tatcatccacagtggcatcaaggtgtggttggcattctcgcctcacgaattaaagaaaaa
ctacatcgcccagtgattgcttttgccccaagcggtgatggtttactaaaaggctcagga
cgctctattcatggtgtacacttgcgagatgcattagaacgtttgaatacattaaatccg
ggattaatggtgaagtttggtggtcatgcgatggcggccggactatctctggaagaagag
aaatttccactttttcagcgtcacttttcggcacttatggcggaattagtttcagctgaa
caattacaaggcgtgattttaacagacggcgagttaagcgacagtcagttatctttacct
attgcggaaatgttaagagaagcagggccttggggacaagcctttcctgagccacttttc
gatggcaaattcagcttattacagcaacgtattgtgggaagcaaacatttaaaaatgatg
cttcaaccgataaatagccatgtaatgattgatgccattgcatttaatgttgatgttaat
atatggccggataacagtattaaaacggttgagcttgcctaccgattagacgtcaatgaa
tttagaggacagcgcaatgcacaactgctggtggagcatatttggccttgttaa
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