Proteus mirabilis BB2000: BB2000_2407
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Entry
BB2000_2407 CDS
T02789
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmib
Proteus mirabilis BB2000
Pathway
pmib03030
DNA replication
pmib03430
Mismatch repair
pmib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB2000_2407 (dnaE)
03430 Mismatch repair
BB2000_2407 (dnaE)
03440 Homologous recombination
BB2000_2407 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmib03032
]
BB2000_2407 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmib03400
]
BB2000_2407 (dnaE)
Enzymes [BR:
pmib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BB2000_2407 (dnaE)
DNA replication proteins [BR:
pmib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BB2000_2407 (dnaE)
DNA repair and recombination proteins [BR:
pmib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BB2000_2407 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGS60866
LinkDB
All DBs
Position
complement(2603411..2606845)
Genome browser
AA seq
1144 aa
AA seq
DB search
MIDGLAKTGPLVKKVASLGMPAFAITDFTNLCGLVKFYGAAHGAGIKPIVGADVYLETEL
LGDEYAHLTILARDNVGYQNLTLLISEAYKHGYGAAGPVIKQEWLTTYKEGLLLLSGGRM
GDVGKFLLRGNRALVEQCLEYYQTHFPDSYYLELIRTGRPDEESYLHEAVALASEKGLPV
VATNDVRFLDSDDFDAHEIRVAIHDGFTLSDPKRPKHYSPQQYMRTEEEMCELFADIPEA
LENSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLIKKSKEGLEERLAFLFPDPQEREK
RRPEYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYSLKI
TDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIDHVADMYGRDAVSQIITFGTM
AAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQLPEIYEADEEVKSLID
MARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDPEGNNPVTQFDKNDVEYAGLVKFDF
LGLRTLTIINWALEMINARRAKKSLEPVDISAISLTDQRSFDMLQRSETTAVFQLESRGM
KDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGVEEISYPDVKWQHESLQPV
LEPTYGVILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEMAKQRSVFEAGAIKNGV
DGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEK
VVGLVDECWRMGLKVLPPDINSGLYHFHVNDEGEIVYGIGAIKGVGEGPIEAIVEARQQG
GHFKDIFDLCARTETKKLNRRVMEKLIMSGAFDKLGPHRAALMSSLEDALKAADQHAKAE
AIGQSDMFGVLAEAPEQVERSYANVPKWPDQVVLEGERETLGLYLTGHPITRYLKEIERY
AAGTRLKDLVPTPRGQMVKVAGLVLASKVFTTKRGNRIGICTLDDRSGRLEIMLFSDALD
KYQHLLEQDRILIATGQVSFDDFNGGLKMTVRELMDINEAREKYARGLAISLSDRQINEQ
LLNRLRGVLEPHRSGTIPVHLYFQKHDACARLRFGATWRVTPTDMLLTDLRTLLGNEQVE
LEFD
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatggattggcaaaaacagggcctcttgtgaagaaagtggcttcgctgggtatg
cctgcttttgcaattacagatttcactaacttatgtgggttagtgaaattttatggtgcg
gctcatggtgccggtatcaaacctattgttggtgcagatgtctatctggaaacggaacta
ttaggtgatgaatacgcgcatttaaccattctcgcccgtgataatgtgggatatcaaaac
ctaacactattgatttctgaagcttataaacatggttatggtgctgccggaccggttatc
aaacaagagtggttaacaacatataaagaaggtctcttgttgctttctggcggtagaatg
ggagatgttggtaaattcctactacgcggtaatcgagctttagttgagcaatgtcttgaa
tattatcaaacgcactttcctgatagctattatttagagcttattcgtaccgggcgtccg
gatgaagagagctacttacacgaagctgtagccttagcatcagaaaaagggcttcctgtt
gttgcgacaaatgatgtccgttttctggatagtgatgattttgatgctcatgaaattcgc
gtggctattcatgatggtttcacattatccgatcctaaacgtcctaaacactacagtcct
cagcaatatatgcgcacagaagaagagatgtgtgagctttttgctgatattcctgaagca
ttagaaaacagtgttgaaatagccaaacgctgtaatgtgaccattcgtttaggtgaatac
tttcttcctcaattcccgactggggatatgagtacagaagatttcttaattaaaaagtcc
aaagagggcttagaagagcgccttgcctttttatttcctgatccgcaagagagagaaaag
cgacgtcctgaatacgatgagcgccttgagattgaacttaaagttattaaccagatggga
tttcccggttactttttgatagtgatggaatttatccaatggtctaaagataacggtgtt
cctgtagggccaggacgtggttcaggtgctggctcactggtggcttattcgcttaagata
acagatctcgatcctctagagtttgatctactgtttgaacgttttcttaatccagaacgt
gtatcaatgcctgactttgacgttgacttctgtatggagaagcgcgatagagttatcgat
cacgttgcggatatgtatggtcgtgatgccgtatcgcaaatcattacctttggtactatg
gcggccaaagctgttattcgagatgttgggcgtgttttaggacacccttatggctttgtt
gatagaatttccaagcttgttccccctgatccgggaatgacgttagaaaaagcttttgct
gccgagccgcagttacctgaaatttacgaagctgatgaagaagtgaaatcgcttattgat
atggcgcgtaaattagaaggggtaacccgtaatgcgggtaagcatgccggtggtgtcgtt
atttctccaaccaaaattaccgactttgcgccactttattgcgatccggaagggaataac
ccggttacacaatttgataagaatgatgttgaatatgccggtcttgttaaatttgacttc
ttagggttaagaacgctgacgataatcaactgggcattagaaatgattaatgctcgacgg
gctaaaaaatcacttgagcctgttgatatatcagccatttcattaaccgatcagcgtagc
ttcgatatgttgcaacgctctgaaaccaccgcggtattccagttagaatcccgtggtatg
aaagatctgataaagcgtctgcgaccagactgcttcgaagatatgattgcgttagttgca
ctgtttcgcccagggcctttacagtcggggatggtggataactttatcgaccgaaaacac
ggtgttgaagagatttcctaccctgatgttaaatggcaacatgagagcttacagcctgta
ttagagccaacttatggtgttatcttgtatcaagagcaagtgatgcagatagcacaggta
cttgccggttataccttgggtggcgcggatatgttacgacgcgcgatgggtaagaaaaaa
cctgaggaaatggcaaaacagcgctctgtgtttgaagcgggggcgattaaaaatggtgtt
gatggcgaattagccatgaaaatctttgacttggtagagaaatttgccggttatggattt
aacaaatcgcactcagcggcttatgccttagtttcttatcaaacgctctggttaaaagct
cactatcctgcggagtttatggcggcagtcatgactgccgatatggataataccgaaaaa
gtggtcggtctggtggatgaatgttggcgaatgggtttaaaagtccttcctccagatatt
aatagtgggctttatcatttccatgttaatgatgaaggcgaaatagtgtatggcataggg
gccatcaaaggggttggagaaggccctattgaggcaattgtcgaagcgcgtcaacaaggt
ggtcattttaaagatatttttgatctctgtgcgagaacagaaaccaaaaaattgaatcgc
cgagtgatggaaaaactgataatgtcaggcgcatttgataaattagggcctcaccgtgca
gcattaatgtcttcgctggaagatgccttaaaggcggcagatcaacacgcaaaagcggaa
gccattgggcaatccgatatgtttggtgtattggcagaagccccagagcaagtggaacgt
tcttatgccaatgtacctaaatggccagatcaagttgttttagaaggtgagcgagaaacc
ctcggtttatatttaacgggacatcccatcacccgttatctaaaagaaattgaacgatat
gcggcaggaacccgtctaaaagatttagtacctaccccccgaggtcagatggtaaaagtg
gcaggattagtccttgcttcgaaagtctttaccactaaacgagggaatagaattggtata
tgtacgttagatgatcgttctggtcgtttggaaattatgttattttccgatgcattagat
aaataccaacatctattggaacaagatcggattttaattgctaccgggcaggtcagcttt
gatgatttcaacggtgggcttaaaatgacagtccgcgaattaatggatattaacgaagcg
cgtgaaaaatatgctcgagggcttgctatctcgttatcagacaggcaaattaatgagcaa
ttattaaatcgtcttcgcggcgttttagaacctcatcgttcaggcacgatcccggttcat
ctttattttcaaaagcatgatgcctgtgcacgtttgcgttttggtgcaacatggcgagta
acgccgactgatatgcttttgaccgatctgcgaactctgctgggtaatgagcaggtggaa
ttagaatttgactag
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