Proteus mirabilis BB2000: BB2000_2562
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Entry
BB2000_2562 CDS
T02789
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
pmib
Proteus mirabilis BB2000
Pathway
pmib03030
DNA replication
pmib03430
Mismatch repair
pmib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB2000_2562 (holD)
03430 Mismatch repair
BB2000_2562 (holD)
03440 Homologous recombination
BB2000_2562 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmib03032
]
BB2000_2562 (holD)
03400 DNA repair and recombination proteins [BR:
pmib03400
]
BB2000_2562 (holD)
Enzymes [BR:
pmib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BB2000_2562 (holD)
DNA replication proteins [BR:
pmib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BB2000_2562 (holD)
DNA repair and recombination proteins [BR:
pmib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BB2000_2562 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
CLEC16A_C
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-ProteinID:
AGS61017
LinkDB
All DBs
Position
complement(2787478..2787888)
Genome browser
AA seq
136 aa
AA seq
DB search
MSRKDKMLAQLGIRQWVLRKPAVLKGEHSVQFPDTTRLLIITDDVVDLNNGLFSDIFSTM
GIDKSEIYCITSEDVSLLTGSFTPACWLLGTDITLPAQYTSLRSPSLHQLYFDANAKRDL
WKQIYQHEDHFPIKPC
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtaaagacaaaatgttagcccaacttggaattcgtcaatgggttcttcgtaag
cctgctgtattaaaaggcgaacattctgtgcaatttccggataccactcgtttacttatc
attactgatgatgttgttgatctaaataacgggcttttctctgatatttttagcactatg
ggaatagataaaagtgaaatctattgtattacctcagaggatgtgagcctgctcacagga
tcatttacaccagcctgttggctattaggtactgatatcactctacctgctcaatatact
tctctgagaagcccttcattacatcaattatattttgatgccaatgcaaaacgcgatctt
tggaaacaaatctatcaacatgaagaccatttccccattaaaccctgctga
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