Proteus mirabilis BB2000: BB2000_2795
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Entry
BB2000_2795 CDS
T02789
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pmib
Proteus mirabilis BB2000
Pathway
pmib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BB2000_2795 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmib03021
]
BB2000_2795 (rpoC)
03400 DNA repair and recombination proteins [BR:
pmib03400
]
BB2000_2795 (rpoC)
Enzymes [BR:
pmib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BB2000_2795 (rpoC)
Transcription machinery [BR:
pmib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BB2000_2795 (rpoC)
DNA repair and recombination proteins [BR:
pmib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BB2000_2795 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
EAD9
Motif
Other DBs
NCBI-ProteinID:
AGS61244
LinkDB
All DBs
Position
complement(3048112..3052341)
Genome browser
AA seq
1409 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVVEGGMTSLERGQILTEEQYLDALEEFGDEFDAKM
GAEAVQNLLQSMDLEQECETLREELNETNSETKRKKLTKRIKLLEAFMQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLETRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPASGDPIIVPSQDVVLGLYYMTRDCINAKGEGMVLSGPKEAERVYRAG
LASLHARVKVRITEEIKDGEGNITTETSLKDTTVGRAILWMIVPKGLPYALVNQPLGKKA
ISKMLNTCYRVMGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPAKKAEIIAEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTETVINRDGEEEQQVSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTESDCGTTEGVMMTPVIEGGDVKEPLRERVL
GRVTAEDILKPGTADILVPRNTLLNEKLCDLLEENSVDSVKVRSVVTCDTDFGVCAKCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVRNKGTLKL
INAKFITNTAGKLVITSRNTELRLIDEFGRTKESYKVPYGAQLSKGDGEAVNGGETVANW
DPHTMPVVSEVSGIIRFADMVDGQTITRQTDELTGLSSLVVLDTAERTGSGKDLRPALRI
TDAQGNDVLIPNTDMPAQYFLPGKAIVQLDDGVAINAGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVISPLDGSDAYEEMIPKWRQLNVFE
GEVVERGDVISDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKVTIENAGSSEFLEGEQVEYARVKVSNRILEEEGKVPATYSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQDRIQRRQQQLPTD
ETEATISADEASANLAELLNAGFGGSSNN
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaaccaagaccgaagagtttgatgcgatc
aaaattgctctggcatcacctgatatgatccgttcatggtcatttggtgaagttaaaaag
ccagaaacaattaactaccgtacgttcaaaccagaacgtgacggccttttctgtgcccgt
attttcggaccagtaaaagattacgaatgtttgtgtggtaaatacaaacgtttaaaacac
cgtggtgttatctgtgagaagtgtggcgttgaagtcacacaaactaaagttcgtcgtgaa
cgtatgggtcacatcgaattagcttctccagtggcgcacatctggttcttgaaatcactg
ccgtcccgtatcggtctgctgttggatatgccactgcgcgatattgaacgtgtactgtat
tttgaatcttatgttgttgttgaaggcggtatgaccagccttgaacgtggccaaatctta
acagaagagcaatacctcgatgcattagaagaattcggtgatgaatttgatgcgaagatg
ggtgctgaagctgttcagaacttgttacagagcatggatctggaacaagagtgtgaaacg
ctacgtgaagagttaaatgagactaactctgaaactaaacgtaagaaactgactaaacgt
atcaagttacttgaagcattcatgcaatcaggcaataaacctgagtggatgatcttaact
gtactgccagtgttaccaccagacttacgtccactggttccacttgatggtggtcgtttt
gcgacttctgacttgaacgatttatatcgtcgcgttatcaaccgtaataaccgtttaaaa
cgcctgctagatttagcagctccagacattatcgtacgtaacgaaaaacgtatgttacaa
gagtctgttgatgcgttattagataacggtcgtcgcggtcgtgcaattacaggctctaac
aaacgtcctctgaaatctttggctgatatgatcaaaggtaaacaaggtcgtttccgtcaa
aacctgttaggtaaacgtgttgactattctggtcgttctgtaatcaccgttggtccatac
ctgcgtctgcatcagtgtggtctgccgaaaaaaatggcacttgaattattcaaaccattt
atttacggaaaactggaaacccgtggtttagcgacaacaattaaagccgctaaaaaaatg
gttgagcgtgaagaagcggtagtttgggatatcttagatgaagttatccgtgaacaccca
gttatgctaaaccgtgcaccgacacttcaccgtttaggtatacaggcgtttgaaccaatc
ctgattgaaggtaaagctattcagttacacccactcgtttgtgcggcatataacgccgac
ttcgatggtgaccaaatggcggttcacgttccattgacattagaagcgcagttagaagct
cgcgcgttgatgatgtcaactaacaatattctgtctccagcaagtggtgacccaattatc
gttccttcacaggacgtggtattaggtctttactacatgactcgtgattgcatcaatgcc
aaaggtgaaggcatggtgttaagtggtccaaaagaagctgaacgcgtttatcgcgcaggt
ttagcctctttacacgcgcgtgttaaagtacgtatcactgaagagatcaaagatggcgaa
ggtaatatcaccactgaaactagcttaaaagacactacagttggtcgtgctattttatgg
atgattgtaccaaaaggcctaccttacgcactggttaaccaaccattaggtaaaaaagct
atttctaaaatgctgaatacctgctaccgcgtaatgggcttaaagccaacagttattttt
gctgaccaaatcatgtataccggttttgcttacgcagcacgttctggtgcttcagtaggt
atcgatgacatggttatccctgcgaaaaaagcagagatcattgccgaggcagaagcagaa
gttgcagaaattcaggaacagttccaatccggtctggtaacagcgggtgaacgttacaac
aaagtcatcgatatttgggctgctgcgaatgaacgcgtcgctaaagcgatgatggaaaat
ctgtctacagaaactgtgatcaaccgtgatggtgaagaagaacaacaagtttccttcaac
agcatctttatgatggctgactccggtgctcgtggttctgcagctcagatccgtcagtta
gcgggtatgcgtggtctgatggctaagccagatggctccattatcgaaaccccaatcact
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctcaacccacggtgctcgt
aaaggtttggcggataccgcactgaaaacagcaaactccggttacttgactcgtcgttta
gttgacgttgcacaagaccttgtcgtaacagaaagcgactgtggtacaaccgaaggtgta
atgatgactccggtcattgaaggtggagatgttaaagagccactgcgtgagcgtgtatta
ggacgggtaacggcagaagatatcctgaaaccaggtactgcagatatccttgttccacgt
aatacgctgttaaacgaaaaactgtgtgatctgttagaagaaaactcagtagacagcgtt
aaagttcgttcagttgtaacctgtgacacagactttggtgtatgtgctaaatgttatggt
cgtgaccttgctcgtggtcatatcatcaacaaaggtgaagctatcggtgttatcgcagca
cagtcaatcggtgagccaggtacacagttaacgatgcgtacgttccacatcggtggtgcg
gcatcccgtgcggcagcagaatcaagcattcaggtacgtaataaaggtacactgaaattg
atcaatgcgaaatttatcaccaacactgctggtaagttagtgattacttctcgtaataca
gaattacgtctcattgacgaattcggtcgtacgaaagaaagctataaagtaccttatggt
gctcaattatcgaaaggtgatggcgaagctgtaaacggtggcgaaacagttgctaactgg
gatccacataccatgcctgtggtgagtgaagtttctggtattatccgttttgctgacatg
gttgatggtcaaaccattactcgtcaaacggatgaattaaccggtctttcttcactggtt
gttctggatactgcagagcgtactggtagcggtaaagatttacgtccagcattgcgcatc
accgatgcacaaggtaatgatgtattaatcccgaatacagatatgccggcacagtacttc
ctgccaggtaaagctatcgttcaattagatgatggcgttgctattaatgcgggtgatacg
ttagcacgtatccctcaagaatctggtggtactaaagatattaccggtggtctaccacgc
gttgctgacttgtttgaagctcgtcgtccgaaagagcctgcaatccttgctgaaatcagc
ggtattgtttctttcggtaaagaaacgaaaggtaaacgtcgcttagttatttctccatta
gatggtagcgatgcatacgaagagatgatccctaaatggcgtcaacttaacgtatttgaa
ggtgaggttgtggaacgcggtgatgttatctccgatggtccagaatcaccacatgacatt
ctgcgcttacgtggtgttcatgcggttactcgctatatcactaatgaagtacaggaagtt
taccgtttacaaggggttaagattaacgataaacacattgaagttatcgttcgtcagatg
ctacgtaaagtgactatcgaaaatgccggtagctctgaattccttgaaggtgaacaagtt
gaatacgctcgtgttaaagtttcgaaccgtattttagaagaagaaggtaaagtaccagca
acatactctcgtgacctattaggtattacgaaagcatcactggctactgagtctttcatc
tctgcggcatcgttccaagaaacaacacgcgtactgactgaagctgctgttgcaggtaaa
cgtgacgaattacgtggtttaaaagaaaacgttattgtgggtcgtctgatccctgcaggt
actggttttgcgtaccatcaggatcgtatccaacgtcgtcaacaacaactgccaacggat
gaaactgaagcaacaatcagtgcagatgaagcttctgctaacttagcagaattgctgaat
gcaggtttcggcggttcatcaaataactaa
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