Proteus mirabilis BB2000: BB2000_3467
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Entry
BB2000_3467 CDS
T02789
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pmib
Proteus mirabilis BB2000
Pathway
pmib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BB2000_3467 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmib03019
]
BB2000_3467 (deaD)
03009 Ribosome biogenesis [BR:
pmib03009
]
BB2000_3467 (deaD)
Enzymes [BR:
pmib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BB2000_3467 (deaD)
Messenger RNA biogenesis [BR:
pmib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BB2000_3467 (deaD)
Ribosome biogenesis [BR:
pmib03009
]
Prokaryotic type
rRNA helicases
BB2000_3467 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
AGS61885
LinkDB
All DBs
Position
3749702..3751537
Genome browser
AA seq
611 aa
AA seq
DB search
MTTETDMTFADLGLSAPILTALNDLGYEKPSPIQQQCIPFLLDGNDVLGMAQTGSGKTAA
FSLPLLHNLDESLKAPQILVLAPTRELAVQVAEAIEDFSKHLPKVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLNRGTLDLSKLKGLVLDEADEMLRMGFIEDVENILSKIPA
EHQTALFSATMPEAIRRITRRFMNDPKEVRIQSSVTTRPDISQSYWMTYGARKNEALIRF
LEAEDFDAAIIFVRTKNATLEVAETLERNGYNSAALNGDMNQSLREQTLERLKNGRLDIL
IATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRAILFVDNRERRLLRN
IERTMKMSIPEVELPNAELISQRRQEKFAQQIAQQLETSNLDQYRALLPKLAPQGEEALD
METLAAVLLKMAQGERALILPPDPVRRPRREFNDRDDRRNDRERSPRRERRDAGEMDLYR
IEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLYGSHSTIELPKGMPGDLLSHFTRTRI
MNKPLNMQLVGDAQPYRERRNSSRRDGQPQGGRRFSKGDQPPRRGNGERGNFRGRGNNEN
APRRRSSTHNQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgactactgaaaccgatatgacttttgctgatctaggtttatcagcacctattttgact
gcactgaatgatttaggctacgagaagccttctccaattcagcaacaatgtattcctttc
cttttagatggcaatgatgttctaggtatggcacaaaccggtagtggtaaaaccgctgcg
tttagcttaccgttattacacaatctagatgaatcattaaaagcaccacaaattttagtg
ttagcaccaacccgtgaacttgcggttcaggttgccgaagccattgaagatttttctaaa
catttaccaaaagtgaatgtcgttgctctgtatggtggccaacgctatgacgttcaacta
cgtgcattacgccaagggccacaagttgttgtgggtacaccgggtcgtttattagatcac
ttaaaccgtggcaccttagatttatctaaactaaaaggtttagtattagatgaagctgat
gaaatgttacgtatgggctttattgaagatgttgagaatatcttaagtaagatcccagca
gagcaccagaccgcattattctctgcgacgatgccagaagctatccgtcgtattacacgt
cgctttatgaatgatccaaaagaagtacgtattcaaagcagtgtaactacacgcccagat
attagccaaagctattggatgacttatggtgcacgtaaaaatgaagcattaatccgtttc
ttagaagcagaagatttcgatgcagctattattttcgttcgtacaaaaaatgcgacctta
gaagtagcagaaaccttagagcgtaatggctataacagtgcggcattgaatggtgacatg
aatcagtctctgcgtgagcaaacattagagcgtctgaaaaacggccgtttagatatcctt
atcgcaacggatgttgctgcgcgtggtctggatgttgaccgtatcagcttggttgtcaac
tatgatatccctatggattcagagtcttatgtacaccgtattggccgtactggccgtgca
ggtcgtgcgggtcgtgcaattctatttgttgataatcgtgagcgccgtttactgcgcaat
atcgagcgcacgatgaagatgtctattcctgaagttgagttaccaaacgcagagctgatt
agtcagcgtcgtcaggaaaaatttgctcagcaaatcgctcaacagttagaaacaagtaac
cttgaccaatatcgtgcattgttaccaaaattagcgccacaaggtgaagaagcgttagat
atggaaacattggcggcggtattactgaaaatggctcaaggtgagcgtgcacttattctg
ccacctgatccagtacgtcgtcctcgtcgtgaatttaacgatcgtgacgatcgccgtaac
gatcgcgaacgttctccacgtcgtgagcgccgtgatgcgggtgaaatggatctctatcgt
attgaagtgggtcgtgatgatggggttgaagttcgtcatattgttggtgctattgccaac
gaaggcgatatcagtagccgttatattggtaatatcaaattatatggttctcactcaacc
attgagttaccaaaagggatgcctggcgatttattaagccacttcactcgtactcgcatt
atgaataaaccattgaatatgcagttagtgggtgatgcacaaccttaccgtgagcgccgt
aatagcagccgtcgtgatggtcagccacaaggtggtcgtcgctttagtaaaggcgatcaa
ccaccacgccgtggtaatggcgagcgtggtaacttccgtggtcgcggtaataacgaaaat
gcaccacgtcgccgtagtagtactcataatcaataa
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