Parvimonas micra: NW74_03110
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Entry
NW74_03110 CDS
T03515
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmic
Parvimonas micra
Pathway
pmic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NW74_03110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmic03019
]
NW74_03110
03016 Transfer RNA biogenesis [BR:
pmic03016
]
NW74_03110
Enzymes [BR:
pmic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NW74_03110
Messenger RNA biogenesis [BR:
pmic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NW74_03110
Transfer RNA biogenesis [BR:
pmic03016
]
Prokaryotic type
tRNA degradation factors
NW74_03110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
PCB_OB
OB_RRP5_4th
S1_RRP5
S1_2
Motif
Other DBs
NCBI-ProteinID:
AIZ36397
UniProt:
A0A0B4S0K9
LinkDB
All DBs
Position
657739..659853
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AA seq
704 aa
AA seq
DB search
MVREFIYDLSGRELKVTIGKVAEQANGSCLVQCGETVVLVNACASKEPREGVDFFPLSCD
FEEKLYSVGKIPGGFIKREGRPSEKSILTSRLIDRPLRPLFPEGYRNDVQVIATALSVEQ
DNQPDILAMIGSSIALTISDIPFNGPTGSVNVGYVDGEYIINPTIAQREKSRLNITVSGT
KDAIMMVEAGADILSEEEVLNAILFAHEEIKSICNFIETIREEIGKEKSEVIIKQRDEDL
FNAIIEFGKEQIISALRTPNKMEREENLDNITKEIFEKFLPDYEDKKGEINSAIESVIVD
EVRRLIIEEGIRPDDRELDEVRKISCERGLLPRTHGSGLFTRGQTQVLTLTTLGAPGEVQ
VLDGVIDEDDKRYMHQYNFPPFSVGDVRPLRSPGRREIGHGALAERALVPVLPSEEEFPY
TMRLVSEVLSSNGSSSQASICGSTLSLLDAGVPIKDSVAGIAMGLIKDEKTNKIAILTDI
QGLEDHFGDMDFKVAGTKDGITALQMDIKIDGISREILATALEKAKRARLHILSIMNDCI
ATPSEEMSKYAPKIFTMQILPEKIREVIGPGGKVINKIIDETGVKIDTFDDGRIAITADS
RENGERAKEMINEIVKEIEVGEIYSGVITTITNFGAFVELIKGKEGLLHISNMTHERLNK
VEDLFKVGDVVEVKVIEIDNQGKIKLSRKALLEKPKKDKEKEEK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggttagagaatttatatatgacttaagtggaagagaacttaaagtaacaataggaaag
gttgcagaacaagcaaacggatcttgtcttgtacaatgtggagaaactgttgtattagta
aatgcttgtgcttctaaagaacctagagaaggagttgacttttttccattaagctgtgat
tttgaagaaaaactttattcagtaggaaaaattcctggtggatttattaaaagagaagga
cgtccaagtgaaaaatcaatattaacttccagactaatagacagaccgttacgtccactt
tttccggaaggatatagaaatgatgttcaagttattgcaacagcattatcagttgaacaa
gataatcaacctgatatacttgcaatgataggttcttctattgcacttacaatttcagat
attccttttaacggacctacaggatctgttaatgttggatatgttgatggggaatatatt
ataaacccgacaattgcacaaagagaaaaatcaagacttaatattacagtatcaggaaca
aaagatgctattatgatggttgaagcaggtgctgatattttaagtgaagaagaagtttta
aatgcaattcttttcgcacatgaagaaattaaatcaatttgtaattttatcgaaacaatt
agagaagaaataggtaaagaaaaatctgaagttattataaaacaaagagatgaagattta
ttcaatgcaattattgaatttggtaaagagcaaattatttctgctcttagaactccaaat
aaaatggaaagagaagaaaatttagacaatattacaaaagaaattttcgaaaagttttta
cctgattatgaagataaaaagggagaaattaattctgctatagaatcagtaatcgttgat
gaagttagaagattaataatagaagaaggaattagaccggatgatagagaacttgatgaa
gttagaaaaatttcttgtgaaagaggacttttaccaagaactcatggttcagggttattt
actagaggacaaactcaagttttaactttaacaactttgggagctcctggagaagttcaa
gttttagatggagttattgatgaagatgataagagatatatgcatcaatacaatttccct
ccatttagtgttggagatgttagacctttaagaagtccgggaagacgtgaaattggtcat
ggtgctttagctgaaagagctttagttcctgttttaccaagtgaggaagagtttccatat
acaatgagattagtttcagaagttttatcttcaaatggatcaagttcacaagcaagtatt
tgtggctcaacactttcattattggatgcaggtgttccaattaaagattctgttgcaggt
attgcaatgggacttataaaagatgaaaaaactaacaaaattgctattttaacagatatt
caaggtttagaagaccattttggagatatggactttaaagttgctggtactaaagatgga
atcactgctttgcaaatggatattaaaattgatggtattagtagagaaattttggcaacc
gcactagaaaaagctaaaagagcaagacttcacattttatcaattatgaatgactgtata
gcaactccaagtgaagaaatgtcaaaatatgctccaaagatatttactatgcaaatttta
ccagaaaaaattagagaagtaattggaccgggtggaaaagttatcaataagattattgat
gaaacaggagttaagattgatacttttgatgacggacgcattgcaattacagctgattca
agagaaaatggtgaaagagcaaaagaaatgattaatgaaattgttaaagaaattgaggtt
ggagaaatttacagtggtgtaattacgacaatcacaaattttggagcattcgttgaactt
attaaaggtaaggaaggcttacttcatatctcaaatatgactcacgaaagattaaataaa
gttgaagatttatttaaagttggagatgtagttgaagttaaagtaatagaaattgacaat
caaggaaagattaaattgtcaagaaaagccttacttgaaaaacctaaaaaagataaagaa
aaagaagaaaaataa
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