Parvimonas micra: NW74_07475
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Entry
NW74_07475 CDS
T03515
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pmic
Parvimonas micra
Pathway
pmic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NW74_07475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmic03019
]
NW74_07475
03009 Ribosome biogenesis [BR:
pmic03009
]
NW74_07475
Enzymes [BR:
pmic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NW74_07475
Messenger RNA biogenesis [BR:
pmic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NW74_07475
Ribosome biogenesis [BR:
pmic03009
]
Prokaryotic type
rRNA helicases
NW74_07475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Cas3-like_C_2
Helicase_RecD
Zn_ribbon_13
Motif
Other DBs
NCBI-ProteinID:
AIZ37173
UniProt:
A0A0B4S2Y3
LinkDB
All DBs
Position
complement(1579688..1581424)
Genome browser
AA seq
578 aa
AA seq
DB search
MIENFNDFNLSKEVLKAVVEMGFEEPSPIQKQAIPTMLNNEDIIGQAQTGTGKTASFGIP
IVEKVDRHNKTTQAMVLCPTRELSIQVAEEISKLAKYKGVTVVPIYGGQPIERQIRSLKM
GVQVVVGTPGRVIDHIKRKTLKTENIKTFVLDEADEMFDMGFREDIEKIIGFLPYERQTT
FFSATMDHEMMDFAARYQSEPRLIKVVPKELTVPKVTQYYFALKHNMKLEILSRILDVQN
PKLTVVFCNTKKMVDDLTAGLQSRGYFADGLHGDLKQIQRDGVMNKFRNSTIDILVATDV
AARGIDVDDVDLVINYDMPQDVEYYVHRIGRTARAGREGTAISFVSPREMNTLSQIQKYT
KTKIEKRDMPTLKDLIKRHEERFMEDIKEEINKNEHTKELNLINILMSEDYSPIDIAACL
LKHYNENNKLNNHEELIDVDIKKNKKKGNDKTSISNKGGKSNVTEKNSGRIYINIGSRKG
VSQRHIVSALCNDANISARDIGDIEIFEKFSFVNIHKNALKDAVNNLNNAHIKGFKVLVE
LANKKEDSSKFSAKPKDKNKKDKKDKKGEKSKRDKKRR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaaattttaatgattttaatttgtcgaaggaagttttaaaagccgttgttgaa
atgggctttgaagaaccttctccaattcaaaaacaagcaattccgactatgttaaacaac
gaagatataatcggacaagcacaaacgggaacaggaaagacagcgtctttcggtattcct
atagtagaaaaagtagatagacataataagacaactcaagcaatggtactttgtccaaca
agagaattgtcaattcaagttgcagaagaaatttcgaaacttgcaaagtataagggagta
acagttgttccaatctatggaggtcaacctatagaaaggcaaatccgttctttaaaaatg
ggagttcaagttgttgtcggaactccgggacgtgttatagaccatattaagagaaaaact
ttaaaaactgaaaatattaaaacttttgtattggacgaagctgatgaaatgtttgatatg
ggctttagagaagatattgaaaaaattataggctttttgccttatgaaagacaaacaact
ttcttctctgctacaatggatcatgaaatgatggactttgctgcaagataccaaagcgaa
ccaagacttataaaagttgtaccaaaggaattgacagttccaaaggtaactcaatactat
tttgcacttaagcataatatgaaacttgaaattctatcccgtatcttagatgttcaaaat
ccaaaacttacagtagttttttgtaatactaaaaaaatggttgatgacttaactgcaggg
cttcaatctcgtggatattttgcggatggacttcatggagatttaaaacaaatccaaaga
gatggggtaatgaataaatttagaaattctacaattgatattctagttgcgacagatgtt
gcagcccgtggaattgacgttgacgatgtagatttagttataaattacgatatgcctcaa
gatgtggaatactatgttcacagaataggtagaactgcaagagcgggcagagagggaact
gcaataagttttgtttctccaagagaaatgaatactttgtcccaaattcaaaaatacaca
aaaactaaaatagaaaaaagagatatgccaactcttaaagacttgattaaaagacatgaa
gaaagatttatggaagacatcaaggaagaaattaataaaaatgaacatacaaaagagtta
aatctaataaatattctaatgagtgaagactattctccgattgatattgcagcttgtctt
ttaaaacattataatgagaataataaacttaacaatcacgaagagcttatagacgtggat
attaagaagaataagaaaaaaggaaatgacaagacttctatttcaaacaagggtggaaag
tcaaatgttactgaaaagaattccggaagaatttatatcaacataggttcaagaaaggga
gtttctcaaagacatattgtttctgcactttgtaatgatgcgaatataagcgcaagagat
attggagatatcgaaatttttgaaaagttcagttttgtaaatattcataaaaatgcactt
aaagatgcagtaaataacctaaacaatgctcatattaagggctttaaggttttagttgaa
cttgcgaacaaaaaggaagactcttcaaaattttctgcaaagccaaaagataaaaataag
aaagataaaaaagacaaaaagggcgaaaagtccaaacgtgataaaaagagaagataa
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