Patiria miniata (bat star): 119724825
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Entry
119724825 CDS
T11642
Name
(RefSeq) replication factor C subunit 1-like isoform X1
KO
K10754
replication factor C subunit 1
Organism
pmin Patiria miniata (bat star)
Pathway
pmin03030
DNA replication
pmin03410
Base excision repair
pmin03420
Nucleotide excision repair
pmin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119724825
03410 Base excision repair
119724825
03420 Nucleotide excision repair
119724825
03430 Mismatch repair
119724825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmin03032
]
119724825
03400 DNA repair and recombination proteins [BR:
pmin03400
]
119724825
DNA replication proteins [BR:
pmin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119724825
DNA repair and recombination proteins [BR:
pmin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119724825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_22
RuvB_N
RNA_helicase
AAA_33
PTCB-BRCT
AAA_17
AAA_5
BRCT_2
AAA_14
NTPase_1
AAA_16
AAA_19
Gemini_coat
RCF1-5-like_lid
AAA_7
AAA_18
Motif
Other DBs
NCBI-GeneID:
119724825
NCBI-ProteinID:
XP_038051996
UniProt:
A0A913ZLR3
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MSETKDIRSFFGVTTSKSKSNQISKSSSGKRQPNGTGGKRKRQLEDEDDDFTDSGKSRKG
TGSKPAKIKKSAVIYDSDSDEEPTSSKGKGKTGSSSSKAASSKQSKKLLSPSPPKQKVIT
VSDFFGSSPVQRSAKKVPAKKQELDIEITPKKPKLTVEQHDDPDFQETLELLDKDHKTPT
KKLRTEDIKSAEKPSPSRRSPRIYKMDVSPALKKGKGLASKIAEKVKATSKTLVEETPER
GEGERSRSRSNVIVEETPQRPSNRRAQTSNVTPSKATPTKATPKRVTPKKGTPSKATPSK
PASSTPSKPASSKDTPTAKPAPSKTTPTKTQSPVGGDSAEKKKGGGANYRRYLSRDGPRS
LGAKEMPQGEENCLAGLTFVITGVLDYVEKEEAKQAIEHLGGKVTSGVTKKTSYLVTGRD
PGPAKIQKAEGQGTTILTEDELFDLIRTRPGKKPSISKEASKPKAEPVPTKQPSLTTPST
KKMESPSTSSMPAVDSKPTPATDQSGESLLWVDKYKPQNMKQLIGQQGDRSCANKLLKWL
KRWHDNNFGPNKERVRYNKDDGFGFKAALLSGPPGIGKTTTAELVCKELGFKTLELNASS
SRSKKTLDLIMKEFLHTDSIEGYFKVKGERSKGQEVKVHRQCLLMDEVDGMSGNEDRGGV
QEFIQMIKKSHIPVICMCNDRNHPKIRSLANHCFDLRFYRPQVKQIKGAMLSIAFKEGVS
IPPQSMDHIITASNQDIRQVLHNMSMWSAGMKKLSQDQVDSDAEKAKKDLKLGPWDVLKQ
VFACDAEAEKMTLTDKMGLFFHDYSIAPLFVQENYLSVAPKKAKGDIKKHLSLLSQAADS
ICSGDLVDRVVRSSQRWSLLPTQAIFASVVPGGAMKGYMRGMITFPSWLGKNSTRNKNRR
LLQEIQQHMRLSSSGSINDINLDYVPRLRDFLTRPLLTQETEGVSEVVELLNSYDLTRED
FDTVLEVSQFEGRKKPMAGVPPKVKGAFTRAFNKEGHMVPYAYGDISKKGKGAMATDAME
GYGEGEEGAETVIEEDSDDDDISKNAMIKVQAAKGQTSSKAKAKGDGSKGKAPAKGRGTA
KGKTKAKK
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaccaaggacatccgcagtttttttggagtaacaacatccaagtctaaatca
aatcagatcagcaagtcatcatctggcaagagacaacctaatggcactggaggaaagcga
aagagacaactggaagatgaagatgatgatttcacagattcagggaagagcagaaaagga
actggaagcaagccagctaaaataaaaaagtcggccgtcatatatgattcagattctgat
gaagaacccacatcttccaaaggaaaaggcaagactggttcaagttcttccaaggctgcc
tcctctaaacagtccaagaaactcttgtctccttctcctcctaagcaaaaggtcataact
gtgtcagatttcttcggctccagtccagtacaaagatcggctaagaaagtgcctgccaag
aagcaagaactggatattgaaatcaccccaaagaaacctaagctaacagttgagcagcat
gatgacccagactttcaggagacattggagctacttgacaaggaccacaaaacacctaca
aagaagctgagaactgaggacatcaaatcagcagaaaaaccctccccttcaaggagaagt
ccaaggatctataagatggatgtcagtcctgctttaaagaaaggtaaaggcttagcaagt
aagatagcagagaaggtcaaagctacgagtaaaactttggtggaagagactccagagaga
ggtgaaggtgaaaggtcacggtcaaggtcaaatgtcattgtggaggaaacaccacagaga
ccctccaacagaagagctcagacatctaatgtcacaccctccaaagcgacgcccacaaaa
gccacacccaagagagtcacacccaagaaaggtacgccttctaaagctacaccatccaaa
ccagcatcctctacaccatccaaaccagcatcctccaaagatacacccactgccaaacct
gctccatcaaaaaccactcccacaaagacccaaagtcctgtgggcggggattcagctgaa
aagaagaaaggaggaggggctaattatcgaagatatcttagtagagacggaccacgatca
ctgggagcaaaggagatgccacaaggtgaggagaattgtttagcaggtcttacgtttgtc
atcactggtgttctggattacgtagagaaggaggaagccaaacaagctattgaacatctt
ggaggcaaagtcacctcaggagtcactaagaagacgtcttatctagtaacgggacgtgac
cctggtccagccaaaatccaaaaggctgaaggacagggcaccacgattcttactgaagat
gaactgtttgacctcatcaggacacgaccaggaaagaaaccatcaataagtaaggaggcc
agcaagcccaaagctgaacctgttcctacaaagcaaccctcactaacaacgccttcgacc
aagaaaatggagtcaccatcaacatcatccatgccggccgtagattccaaacctactcca
gcaactgaccaatcaggcgagagcttactgtgggtggacaaatacaaacctcagaatatg
aagcagctgattggtcaacagggagaccgaagctgcgctaataaacttctgaagtggctg
aagcggtggcatgataataactttgggcccaacaaggagagagttcgctacaacaaggac
gatggatttggttttaaggcagcgttactctcaggccctccaggaattggcaagacaact
accgcagaacttgtttgcaaggagcttggtttcaagacgttggaactgaacgcaagttca
tcaagaagcaagaagacgttggatctcataatgaaggaattcctccacactgactcaatc
gaaggctacttcaaggtcaaaggtgaaaggagcaagggtcaagaggtcaaagttcaccgg
cagtgtctgttgatggatgaggtggatgggatgtctgggaatgaagacaggggaggtgtt
caggaattcattcagatgatcaagaagtcccatattccagtgatctgtatgtgtaatgac
aggaaccatcccaagataagatctctcgccaatcactgctttgatcttcgcttctaccgg
cctcaggtcaaacagatcaagggcgccatgttgtcaattgcgttcaaagagggcgtgtcc
atcccgccccaatccatggatcacatcatcactgcgtccaatcaggatattcgacaggtg
cttcataacatgagtatgtggagtgcagggatgaagaaattgagtcaagaccaggtggat
tccgatgctgagaaagctaagaaagaccttaaactgggaccatgggatgtcttgaagcaa
gtctttgcttgtgatgcagaagcagagaagatgacactaacagataagatgggtctcttc
ttccatgattactccatcgctccgctgtttgttcaagagaactatctctcagttgcaccc
aagaaagcaaagggtgacattaagaaacatctcagtcttctaagccaagcagcggacagc
atctgcagcggtgatttagtggatagagtggtacgctcctcacaacgatggagcctactt
cctacacaggccatctttgcaagtgttgtgccaggtggggcaatgaagggttacatgcga
ggtatgatcacgttccctagctggttaggaaagaattcaacaaggaacaagaatcgtcgc
ctgctacaggaaattcagcaacatatgagattatcttcctcaggcagcattaatgacatc
aaccttgactacgtacctcgtctgcgtgacttcttgacccgacctttgctgacccaggag
acagagggtgtgtcagaggttgtagagttgctcaatagctatgatctgactagagaagac
tttgatacagtactagaagtgagtcagtttgaaggaaggaagaagcctatggcaggagtt
ccacccaaggtgaaaggtgccttcacacgagcattcaacaaggagggtcacatggtgcca
tatgcatatggcgacatcagcaagaaaggtaagggtgccatggcaacagatgcgatggaa
ggctatggtgagggagaggaaggggcggagactgtcatagaggaggatagtgatgacgat
gacatcagcaagaatgctatgattaaggtccaagctgccaagggtcagacaagcagcaaa
gctaaggccaaaggtgacgggtcaaagggcaaagctccagctaaaggaaggggaactgcg
aaaggaaaaacaaaagccaaaaagtag
DBGET
integrated database retrieval system
