KEGG   Patiria miniata (bat star): 119730489
Entry
119730489         CDS       T11642                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
  KO
K20181  vacuolar protein sorting-associated protein 18
Organism
pmin  Patiria miniata (bat star)
Pathway
pmin04140  Autophagy - animal
pmin04142  Lysosome biogenesis
pmin04145  Phagocytosis
pmin04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pmin00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    119730489
   04142 Lysosome biogenesis
    119730489
   04140 Autophagy - animal
    119730489
   04148 Efferocytosis
    119730489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmin04131]
    119730489
Membrane trafficking [BR:pmin04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    119730489
   Hops complex
    119730489
SSDB
Motif
Pfam: Pep3_Vps18 VPS18_solenoid_2nd VPS18_solenoid_1st VPS18_RING_C Clathrin TPR_Vps41 zf-RING_5 zf-RING_Vps41 TPR_IF140-IFT172 zf-RING_16 zf-C3H2C3 zf-RING_2 zf-RING_11 zf-C3HC4_2 zf_RING_Vps8_fungal zf-rbx1 zf-ANAPC11 WD40_CDC20-Fz Hemerythrin zf-RING_UBOX
Other DBs
NCBI-GeneID: 119730489
NCBI-ProteinID: XP_038059367
UniProt: A0A914A678
LinkDB
Position
Unknown
AA seq 980 aa
MASLFDQYEQATARAASSISQGPKEVVSAPITSGYVTAKMEEEVKIFSRMKINFTPPRPI
THLVVNNNMLMMAMSDNVILRIDLEHPDQPDEVKLGEYQIHKLFLDPTGRHLIISTEQQE
VFYLSRTGRKGKPLQKLKGHIIDSIGWNKLNTSDSTTAEVLMGTSKGLIFETEIQSGDDS
RFFQQSLDQYWKQVFNLGKEGAVPVTGLEVELVQPALQNERRFFIMATTPGRLYQFVGII
PSSSETPVFQNVFHRYEASPASFLELPGNFGYSELQFSYGSKKTMPSNFAWMTGPGIYYG
VFDFNSQSSDNLTKDSRLLPYPDTGKGDVTAAKPIAMALTEFHVLLLFQDRLKVMCVLNE
QLIDEEVYNVKYGKILGVCRDKTRGTIWTFTDQSVFKYKVVKESRDVWRMYLDQGNFDRS
KEFCQDNPANLDKVLTRQAEYFFENQKYDKSALYFAMTERSFEEVALKFIGAQQTTALRM
FLDKKLSTLRPQEKTQMTMLVMWLIELYLNQLGEFRAREEARNTHDKVHTEFQKFLAQTR
VMECLSGNVDTVYDLIASHGDVEDMVFFAMLMKDYERVISHHIQHDDYHSALEVLRKPKD
TGLYYKFSPVLMQHIPNELVTAWIDLGKTLDPKKLIPALVQYDHSAQASQVNEAIRYLRF
CTLNLFNTEQAIHNYLLSLYAKFQPEELMEYLEQQGDIEDRVHYDLKYALRLCAEHNHKR
ACVHIYTTMGLYEEAVDLALQVDVDLAKQSAEKPEDDNELKKKLWLRIARHVVEKQSDIQ
EAMLVLQECPQIKIEDILPFFPDFVTIDHFKDAICNSLADYNEHIESLKKEMEDATDSAQ
NIRGDIQEVRNKYGIVGGSQKCASCNYPLLTRSFYLFPCQHMFHADCLNKEVLPHLTMVK
RTRMSELQRRLSQLQTHRSPASSAPSGDAITKRDELDQIKNELDDITAAECVYCGEIMIK
SVDRPFIEPDDYDATIKSWE
NT seq 2943 nt   +upstreamnt  +downstreamnt
atggcttcactgtttgaccagtatgagcaagccacagcaagagctgcctccagcatttct
caggggccaaaggaggtagtctctgcacctatcacctctggatacgtaacagcaaaaatg
gaggaagaggtcaaaattttctccagaatgaagatcaacttcacgcctcctcgaccaatc
actcaccttgtcgttaacaacaacatgctgatgatggctatgtccgacaatgtcatcttg
cgaattgatctggagcacccagaccaaccggacgaggtgaaattgggagagtatcagatt
cacaagttgtttctggatcccaccggccgtcatctcatcatcagcactgagcagcaggaa
gtcttctatctatccaggacaggtcgtaagggtaaaccactccaaaaactcaagggccac
atcatcgattccattggctggaacaagctgaataccagtgacagtacaactgcagaggta
ctgatgggaaccagcaaaggtctgatatttgagacagaaattcaatcaggcgatgacagt
aggttcttccagcaaagtcttgaccagtattggaaacaggttttcaatttgggcaaagag
ggcgctgttcctgtcacaggtcttgaggtggaactcgtccaacctgctctgcagaatgaa
cggcgattctttataatggctacaactccaggacgactgtaccaatttgttggcatcatc
cctagttcttctgagacacctgttttccaaaatgtctttcataggtacgaggctagtcct
gctagttttctagaattgccgggtaactttggatacagtgagctccagttcagctacggc
agcaagaaaaccatgccgtccaattttgcctggatgactggtccaggcatatactatggc
gtctttgacttcaatagtcaatcctcggacaatctcaccaaggacagccgtctgttgccc
tatcccgacacgggcaaaggggacgttactgctgctaaacccatcgctatggcattgact
gagttccatgttcttcttctattccaagacagattaaaggtgatgtgtgttttgaatgag
caactgattgatgaagaagtttacaatgttaaatacggtaaaatattaggcgtttgtcga
gacaagaccaggggaaccatttggaccttcacagaccagagtgtcttcaagtacaaagtg
gtcaaagagtcgagggatgtgtggcgtatgtacctggaccaaggcaactttgaccggtcc
aaggaattttgccaggacaatccggccaatttggacaaggtgctgaccagacaagccgag
tatttctttgaaaatcaaaagtacgacaagagcgccctctattttgccatgacggagagg
tcgtttgaggaggtggcgctcaagttcatcggtgcccagcagacgacggcgctgcgcatg
ttcctcgacaagaaactcagcacactcaggccgcaggagaagactcagatgaccatgttg
gtgatgtggttgattgagctgtacctgaatcagctgggggagttccgagctagggaagag
gctagaaacacccacgacaaggtccacaccgagttccagaaattcctggcccaaaccagg
gtcatggagtgtctgagcggcaacgttgatacggtgtacgacttgatcgcgagccatgga
gatgtggaagacatggtgttctttgctatgctcatgaaagactacgagcgagtcatcagt
caccacatccaacacgatgactaccactccgccctcgaggtcctccgcaagcccaaggac
accgggctgtactacaagttctcgccggtcctgatgcagcatattcccaacgagctggtc
actgcctggattgacctgggcaagacactggatccgaagaagctgatccccgccctggtg
cagtacgaccactcggcccaggccagccaggttaatgaggcaatccgttacttgaggttc
tgcaccttaaaccttttcaacacggagcaagccattcacaactatctactgtcgctgtat
gccaagttccagccagaggagctcatggaatacctggagcaacaaggggatattgaagac
agagttcattacgatctgaaatacgctttgagactttgcgctgaacacaaccacaagagg
gcgtgcgtccacatctacacaacgatgggcctgtacgaagaggcagtggatttagcatta
caggtggatgttgatctggccaagcagagtgcagagaagcccgaagacgacaacgagttg
aagaagaagctgtggttgcgcatcgccaggcacgttgtggagaaacagagcgatatccag
gaagccatgctggtgctacaggaatgccctcagatcaagatagaagacatcctgccattc
tttccagactttgtcaccattgatcatttcaaggacgccatctgcaactccctggctgat
tacaacgagcacattgaatccctcaagaaagagatggaagatgctacagacagcgctcaa
aacatccgaggcgacatccaggaagtcagaaacaagtatggcattgttggaggcagccag
aagtgtgcgtcatgtaactatccgctgttgacgcgatcattctacttgttcccctgccaa
cacatgttccatgctgattgcttgaataaagaggtcctaccccatctgaccatggtcaag
cgcactcgcatgtctgagctacagagacgactgtcccagctacagacccatcgatcgcct
gcctcatcggcgccctctggtgacgcaataacaaagcgggacgagttggatcagatcaag
aacgagttggacgatatcaccgcagccgagtgtgtgtactgtggcgagatcatgatcaaa
tcggtggatagacctttcattgagcccgacgattacgatgccacgataaagagctgggag
taa

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