Patiria miniata (bat star): 119743404
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Entry
119743404 CDS
T11642
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
pmin Patiria miniata (bat star)
Brite
KEGG Orthology (KO) [BR:
pmin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmin03021
]
119743404
03036 Chromosome and associated proteins [BR:
pmin03036
]
119743404
Transcription machinery [BR:
pmin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119743404
Chromosome and associated proteins [BR:
pmin03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119743404
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Tex_central_region
HHH_3
Tex_YqgF
Spt6_S1
S1
SH2
HHH_9
S1_RRP5
Tex_N
Arc_PepC
Motif
Other DBs
NCBI-GeneID:
119743404
NCBI-ProteinID:
XP_038075727
UniProt:
A0A914BJV3
LinkDB
All DBs
Position
Unknown
AA seq
1874 aa
AA seq
DB search
MADFFDSEAEVSDDEDIKLSSDEEDEEEGEGENENLDDLINDEDEEEDQRGSDSEGEIGK
KKKRKRREIDDRLEDDDYELIEENTGFKVDRKKFRRLRQISDEEDSEDEEGISGPQAEAT
QRDAIAKEIFQDDIEGEDDEPPEEGEIREPAPEHDQYAEIESDEEESDPDDFIVDDEGQP
IARRKKKGHKSHRYTDSALQEAQDIFGLDFDFEEFNQYGEDYEEALEEDSEYEDEEEDVD
LGDEGPRRVRKTGKKRTSKKSIYDVFEPSDLERGHFTDIDNEIRATDIPERLQLRRVPVT
KADDAELDEEADWIYRQAFLTPPVSNQEYSEQDSGYGSGYERKPPRTKNRIREALHFMRN
QHFEVPFIAFYRKEYVEPELNFNDLYRVYHWDEKWCQLKNRKANLKKLFEKMQAYQFDQM
STEELLPDSVRPLTETDLDRLNDVDSMDKLKDVYMHFLLYYGRDIPKMHNALKKSKKKTG
RTKLVRRPAKKMVKVMVRRPKMKKPKENEDDDSDDDKDWTEEDAKKDEESDSEEEEVETE
EEVDTEEEVEVEVDEDGNEQTEDGTSHQIKQATRKSMYAICQEAGLDALAKKFGLTPEQF
GENLRDNYQRYDPEQHPVEPAETAKDFIGSKFQSEESVMKAACYMVALQLAHDPLVRQCV
RQTYYERAKISIRPTKKGMKEIDETHPSYGCKYLKNKPVKDLFGDKYLKLLQAEDEKLLK
ITMDIDLDKSSDSSYQSQSYFEDIKQLYYRDEFSHTVQEWNKERSAAIETALYKILYPEM
AKELKSRLVQEAKEGIIKMCCRKMFDWLKVMPFQADQQLEEDEDDYLDGQGHVGLRVMGL
AFTSEMDNAAFCVLIDGDGEVVDFLRLPHLLRRTNSYYQRDRELKQADMEALKEFLSSKK
PHVVAVASESRVTLGVIKDVQQCVSDLEAEQQIAPISVQLVDSNVAQVYSATNMAESEFR
KYPQLLRQAISVARRLQDPMVELARLCNSDEDLMCLKFHPMQDSVSREELQEALHQEFIY
RVNEVGVDINRAMAHAHSQSLVQFICGLGPRKGHSILRTLKQQNQRLENRNQLVTVCKLG
PKVFINCAGFIRIDTASLGDSSDSYIEVLDSTRIHNETYEWARKMAVDALEYDESADDAN
PAEALEEILDNPDKLKDLDLDAFAEELERQGYGNKSITLYDIRAELNNRYKDLRTPYHPA
SAEETFSMLTKETPDTFYRGKMVLCTVTGIARRRPQKDQLDQANPVRNDETGLWQCPFCQ
QDNFPELSEVWSHFDGGDCPGRSVGVRTRLDNGIAGFIPTKMISDKQVNSPEERVKVGMT
LHCRITKIEIEHFRVDLTSRSSDLQDKSGEFAPPRDTFFDHTLYEKDQRKDEESKKKVAQ
AYTKRVIVHPSFHNITFKDAEKLLVNMDLGEVVIRPSSKGSDHLTTTWKVDEGIYAHIDV
REEGKENAFSLGTSLWIGSEEFEDLDEIIARHVQPMAAYVRDTMQHKYYRDTEGGKRDAM
EKVISAEKRKQPSRIPYFMSFSKEYPGKFLLSYQPRSKVRHEYVTITPEGYRYRGQIHQS
INALHRWFKEHFRDPIPGVTPASIHRTPMVAAPERTPAVYSYMGTPMIQKSGAGYSQLYA
TPSMSIATPRQTPGATPQINAAARYGAYSGTYSNIPSYATPQNNPLATPLMTPSYQAMQT
PSQGPIRTPQINPMRTPQINPLRTPQTNTNPMRTPQQNPMRTPQHAPAGSTTPQINQMRT
PQYQPTPKQSWGSSSSASASATAQQVVNALKQQLQRTGGPRSNAASVDWASQAAQWASRR
QDQTKGKNPQASPANPSSRSSYHPSPRNYPQPSPKSYSHRSPKPSPYPEPSPMSISTTPA
HSVGGDATPLFDET
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttctttgacagcgaagcagaggtgtccgacgatgaagacatcaagctgagc
agtgatgaggaggatgaagaggaaggcgaaggtgagaatgagaatctggacgacctgatc
aatgacgaggatgaagaggaggaccagcgtgggtcagactcggagggagagatcggcaag
aagaagaaacgcaaacgcagagaaattgatgacagacttgaagatgatgattatgagctg
attgaagagaacacaggattcaaggtggacaggaaaaagttccgtcgtttgaggcagatc
tcggatgaggaggacagcgaggatgaggaagggatctctgggccgcaggcggaggccacc
caacgagacgccatcgccaaggagatcttccaagacgacatcgaaggagaagatgacgaa
ccaccggaagaaggagagatccgtgaaccagctcctgaacatgaccagtatgctgagatt
gagtcagatgaagaagagtcagatccagatgattttatcgtggatgatgaaggccaaccc
attgccagaaggaagaagaaaggtcacaaaagtcacagatacaccgactcagccttacaa
gaagcccaagacatctttggtctggactttgactttgaagagttcaatcagtatggtgag
gattacgaggaagcgttggaggaagattcagagtatgaggatgaagaagaggatgttgac
ctgggtgacgaaggaccaagaagagtccggaaaactggcaagaaacgaacctccaagaag
agcatctatgatgtgtttgagccaagtgacttggagaggggtcactttaccgacatcgac
aatgaaatccgggcaactgacataccagagagactacagcttcgccgggtaccagtcacc
aaagcagacgacgctgaacttgatgaggaagctgattggatctacagacaggccttcctg
acgccaccagtctccaatcaggaatactctgagcaggacagtggctatggttctggctat
gagaggaagccgcctcgcaccaagaaccgaatcagagaggctctgcatttcatgcgcaat
cagcacttcgaggtgccattcatcgccttctacagaaaggagtacgtggaacctgagctg
aacttcaatgatctttacagagtgtaccattgggatgagaagtggtgtcagctgaagaat
cgcaaggctaacctgaagaagctgtttgagaagatgcaggcctatcagtttgatcagatg
agcacagaggaactactaccggactcagtcagaccactgacagagacggacctggacaga
ctgaacgacgtagactccatggacaagctgaaggacgtctacatgcacttcctgctgtac
tacggccgggacatccccaagatgcacaacgccctcaagaagtccaagaagaagaccggg
aggaccaagctggtccgacggccggccaagaagatggtcaaggtcatggtccggagacca
aagatgaagaaacccaaggagaacgaggatgatgacagtgatgatgacaaagattggacc
gaagaggatgccaaaaaggatgaggaatctgattctgaggaggaggaggttgagaccgag
gaggaggtagacactgaggaagaggttgaggtagaagtcgacgaggatggcaatgagcag
acagaggatgggaccagtcatcagatcaagcaggctaccaggaagtctatgtatgccatc
tgtcaagaggctggactcgatgccctggccaagaagtttggtctgaccccggagcagttt
ggtgagaacctacgggataactaccagcgctacgacccagagcagcacccagtggagcca
gctgaaacggctaaggacttcatcggcagcaagttccagtcagaggagtctgtgatgaag
gcggcatgctacatggtggccttgcaactagcccatgatcccctggtgcgccagtgtgtc
cggcagacctattacgagagagccaagatcagtatccgcccaaccaagaagggaatgaag
gaaattgatgagacccacccatcttacggatgtaaatacctgaagaacaaacccgtcaag
gatctgttcggcgataaatacttgaaactcctgcaagcggaggacgagaaactcctcaag
atcaccatggatatcgacctggacaaaagcagtgacagcagctaccagagccaatcctac
tttgaggatatcaagcagctgtactaccgagacgagttcagccacaccgttcaggaatgg
aacaaggagcgcagcgccgccatcgagacagcgctctacaagatcctataccctgagatg
gctaaagagctcaagagcaggctggtgcaggaggctaaggagggcatcatcaagatgtgt
tgtcggaagatgtttgattggctgaaggtgatgccattccaagctgaccagcagctggag
gaagatgaggatgattatctggatggtcagggtcacgtggggctacgcgtcatggggctg
gcattcaccagtgaaatggacaatgctgcattctgtgtcctgattgacggggatggggaa
gtggtagacttcttaagactgccccacttactgcgccggaccaacagctactaccagcgg
gaccgggagctgaagcaggctgacatggaggcgctcaaagagttcctgtccagcaagaag
ccgcacgtggtagccgtagcctcagaatcaagggtgaccctgggtgtgatcaaggacgtc
cagcagtgcgtatcagacctagaagcagagcagcagattgcaccaatcagcgtccagcta
gtggactccaacgtggcgcaggtgtactctgccaccaacatggctgaaagtgagttcagg
aagtacccccagctgttacgtcaggccatctcggtagcccgcaggctgcaggatcccatg
gtggaactggccagactctgcaactcagacgaggatctcatgtgtctcaaattccatccc
atgcaggactcagtgagcagggaggagttacaggaagccttgcatcaagagttcatctac
agggtcaacgaggtgggcgtggatatcaacagggccatggctcatgcacactctcaaagc
ttggtgcagttcatctgtggtctgggaccacgtaaaggacactccatcttaaggactttg
aagcagcagaaccagcgtctagagaatcgcaatcagctggtgacagtctgcaagctgggc
cctaaggtcttcatcaactgtgcaggattcatccggattgacacagcctctctcggagac
agctcggactcatacattgaggtcctggacagcacccgtatccacaacgagacctacgag
tgggctcgtaagatggccgtggatgccttggagtacgacgaatcggctgacgatgccaac
ccggccgaagcgctggaagagatcctggataatccagacaagctgaaggatctggatctg
gatgcgttcgccgaggagctggaaagacagggttatggcaataagagtatcaccctgtat
gatatccgagctgagctgaacaatcgctacaaggatctgcgcacaccttaccacccagcc
tccgctgaagaaaccttcagtatgctgactaaagagacaccagacaccttctacagaggt
aagatggtcttgtgcacagtgaccggtatcgcccggcgacggcctcagaaggaccagcta
gaccaagctaacccagtcaggaatgatgagacagggctgtggcagtgcccattctgccag
caagacaacttccctgaactcagtgaggtgtggagccattttgacggtggtgactgccct
gggcgatccgtgggtgtccgaacccgcctagataacggcatcgctggattcatccctacc
aagatgatcagcgacaagcaagtcaatagcccagaggagagggtcaaggttggcatgaca
ttacactgtcgcatcaccaagatcgagatcgagcacttccgcgtggacctgaccagccgt
agctcggacctccaagataagagcggagaatttgccccgccgcgggacacgttctttgat
cacactctgtatgagaaggaccaacgcaaggatgaagagagcaagaagaaggtagctcaa
gcatacacgaagcgagttattgtccacccctccttccacaacatcaccttcaaggacgca
gagaagcttctggtcaacatggatctgggagaagtggtgatcagacccagcagcaagggt
tcagatcacctgacaaccacatggaaggtggatgagggaatctatgcccacattgacgtc
agagaagaaggcaaggagaacgccttcagtcttggcacgtcactctggataggaagcgag
gagtttgaagacttggacgaaatcatcgcccgccacgtccagcccatggcggcctacgtg
agggacaccatgcagcataagtactaccgggacaccgagggcggcaaacgcgacgccatg
gagaaggtgattagtgcagagaaacgcaagcagccctcacgcatcccctacttcatgagc
ttctcaaaggagtatcccggcaagttcttattgtcctatcagccacgtagcaaggtcagg
catgagtacgtgaccatcacaccggaaggctatcgctaccgggggcagatccaccaatca
atcaacgccctacatcgatggttcaaggaacacttcagggaccctatacctggtgtgacc
ccagccagcatccatcgcactcccatggtggctgctccagagagaacaccggcagtctac
agctacatgggcacgcccatgatccagaaatcgggcgccggctacagccaactctatgcc
acgcccagcatgagcatagccacgccccgccagacacccggtgccacgccccaaatcaat
gccgccgcccgctacggagcctactctgggacatactccaacattccatcctatgccacg
ccccagaacaacccactagccacgcccctgatgacaccctcataccaggcaatgcagacc
ccctcacagggtcccattcgcaccccgcagatcaaccccatgcgcaccccgcagatcaac
cccctgcgcaccccacagaccaacaccaaccccatgcgcaccccgcagcagaaccccatg
cgcacccctcagcacgccccagcgggctccaccacccctcagatcaaccagatgcggacc
cctcagtaccagcccacccccaagcagagttggggcagcagctcatcggcctcagcctcg
gccacggctcagcaggtggtcaacgcactgaagcagcagctacaacgaactggtggacca
agatccaacgccgcgtctgttgactgggccagccaggccgcccagtgggcctccagacga
caggaccagaccaagggcaagaacccccaggccagccccgccaacccctcatcccgttcc
tcttaccatcccagtcccaggaattacccccagcctagccccaagagctactcccatcgc
agccccaaaccctccccgtacccagagcccagccccatgtccatctccaccaccccggcg
catagcgtgggtggggacgctactccactcttcgacgagacttag
DBGET
integrated database retrieval system
