Patiria miniata (bat star): 119745364
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Entry
119745364 CDS
T11642
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
pmin
Patiria miniata (bat star)
Pathway
pmin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119745364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmin03041
]
119745364
Enzymes [BR:
pmin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119745364
Spliceosome [BR:
pmin03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
119745364
Complex B
119745364
Complex C
U2 SnRNP specific factors
119745364
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119745364
NCBI-ProteinID:
XP_038077601
UniProt:
A0A914BPH4
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MFNQGWRGGGGGGRSYSNLGAGKSYHAVPNAKPAPANSYSHTQYMEAMLKRHRTEAEYFE
ADSDEEDAQTKKHEESDSEEDPLDAFMAGINEDLAKEKTAPKKHSSEDKKKAVRQDIEEL
DDQESFFKYMEENPNAGVPMYDADDILEYDDDGNPIIPERSKFIDPLPPVDHTEIKYEPF
AKNFYEEHKDIAALKYSEILDLRKKFGIRVSGFDPPKPVSSFGHFGFDQQLMHYIRKSEY
SQPTPIQAQGVPIALSGRDIIGIAKTGSGKTAAFVWPMLVHVMDQRAVKTTEGPIGLICA
PTRELAQQIYVEVKRFGKAYDIKAVCAYGGGNMWEQQRACQEGTEVIICTPGRLIDLVKK
KSTNLQRVTFLIFDEADRMFDMGFEPQVRSIANHVRPDRQTLLFSATFRKKVERLARDIL
TDPIRVVQGDAGEANEDVTQIVQVFRDEKAPDSKWKWLTGQLVRFTTLGSVLIFATKKLN
AEELANNLRQQDFNVGLLHGDMDQSGRNSVITEFKRKVIPIMVATDVASRGLDIPSVKTV
VNYDVARDIDTHTHRIGRTGRAGEKGTAYTLVTSKDVYFAGDLVRNLEGANQSVTQSLLD
LAMQNPRFRKTRSTHGTKGKLSGGSGLGYGKERSKNKERPGLGSQDDSGGKSAPTLGPLG
GGYAGADPSESEGGRLTSVRNTFKAQYQRHFQKASSSSTSKTFSTENTGHYAMPPKNPAA
ASLSHSHPSLAESGLSLKALGSTGLSLKAQGAAGLSLKAPVSHPKGTLSTLVPQESKDKP
ANTSATPSRKSKWDIGGPKSPEAGTRNNTDGAGKKQEGSRWDTAPQRDSGDGSSSQDKGE
AGLSSPTGRLDNHGYWQLGGFGQPGAVSQDAQDGRNHALEEALKRAHQLDEMVAERPKKR
KSRWDI
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcaaggatggcgaggaggtgggggtggtgggaggagctacagtaacttgggg
gcgggcaaatcctaccacgctgtccccaacgccaaaccagcgcctgccaattcttactct
cacacacagtacatggaggctatgctgaaacgccatcgcacagaagctgagtattttgaa
gctgacagtgatgaggaggacgcccaaacaaagaaacatgaggagagcgacagtgaagaa
gacccattagatgctttcatggccggcatcaatgaggatttggcgaaggagaaaacagct
cccaagaagcacagcagtgaagacaagaagaaagccgttaggcaagacattgaggaactg
gatgatcaggaatctttcttcaagtacatggaggagaatcctaatgccggcgtgccgatg
tacgatgcggacgacatcctcgaatacgatgacgacggcaatcccatcattcctgaaagg
tcaaagttcatcgacccactcccaccagtcgatcacacggagatcaagtacgaaccgttt
gcgaaaaacttctacgaagaacacaaggacattgcagcactgaagtactcagaaatactg
gatttgcggaagaaatttggaatcagagtgtccggttttgacccacccaagcccgtaagt
agcttcggtcattttggcttcgaccaacaactcatgcattacatccgcaagtcggagtat
tcccagcccacccctatccaggcccagggagtacccatcgcactgagcggccgtgacatc
atcggaatcgctaagacaggaagcggaaagactgcggcgttcgtttggcctatgctggta
cacgtaatggatcagagagctgtgaagaccaccgaagggcccatcggcttgatctgtgcc
ccaacacgggagctggctcagcagatttacgtggaagtgaagcgttttgggaaggcctac
gacatcaaggcagtgtgcgcctacggaggcgggaacatgtgggagcagcagagggcgtgt
caggaggggacagaggtcatcatatgtacaccgggtcgtctgattgacctggtcaaaaag
aaatccaccaatcttcagcgggttaccttcctaattttcgatgaggcagatcgaatgttt
gacatgggttttgagccacaggttcggtccattgcaaaccacgtcaggccagacagacaa
acgttgttgttcagcgcaacattccgcaagaaggtagagagactggcccgagacatcctg
actgatccaatcagagtggtgcaaggcgatgcaggggaggcgaacgaagacgtgacgcag
atagtccaagtgttccgggacgagaaggcgcccgacagcaagtggaagtggctaaccggc
cagctggtccgcttcaccaccctgggcagcgtgctcatctttgccaccaagaaactcaac
gcggaggaactggccaacaatctcagacagcaggacttcaatgttgggctgttacacggt
gacatggaccagagcggaaggaacagtgtcatcacagagttcaagaggaaagtcatccct
atcatggtagcaactgatgtagcttcacgtggtctggacataccgtcagtcaaaaccgtt
gtcaactacgatgtagctcgggatatcgacacgcatacgcaccgcatcggacggacgggc
agggcaggggagaagggcactgcctacacgttggtgacgtctaaggatgtctactttgcc
ggtgacttggtccgtaatctggaaggggctaaccagtctgtcactcagtcgctcttggac
ctcgccatgcagaatccgaggttccgtaagacccgcagtacccacggtaccaagggcaag
cttagcggtggctcaggacttggctatggcaaggaacgatcaaagaacaaggagaggcca
ggcctgggaagccaggacgactctggagggaagagcgcccccacgctgggccccctaggg
ggaggctacgcaggcgcagacccatcggagtcggagggcggacgtctcacgtccgtgagg
aatacattcaaggcccagtatcagaggcacttccagaaagccagctcctcgtccacttcc
aagaccttctcgactgagaacacgggccactacgccatgcctcccaagaaccccgccgcg
gcaagcctatcccacagccacccgagccttgctgagagcgggctgagcttaaaagccctg
gggagtaccggactgagtctgaaggctcaaggagcagccgggttaagcctgaaggccccc
gttagtcacccgaagggtaccttgagcacgctggtcccgcaagagagcaaagacaagccg
gccaacacgagcgcgacaccatctcggaagtccaaatgggatatcggagggcccaagtcg
ccagaagcaggaactaggaacaacacggacggcgcaggcaaaaagcaggagggcagtaga
tgggatactgccccacagagggacagcggggatggtagctcctcgcaagacaagggtgag
gcggggctctcaagtcccacgggtcgcttggacaaccacggctactggcagctgggtggg
ttcggacagccgggtgctgtatcccaggatgctcaggacggtcggaaccacgccctggag
gaggccctgaagagggcccaccaactggacgagatggtggcggagaggcccaagaagagg
aaaagccgatgggatatctag
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