Prochlorococcus marinus MIT 9211: P9211_16051
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Entry
P9211_16051 CDS
T00616
Symbol
rpoC2
Name
(GenBank) RNA polymerase beta prime subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pmj
Prochlorococcus marinus MIT 9211
Pathway
pmj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P9211_16051 (rpoC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmj03021
]
P9211_16051 (rpoC2)
03400 DNA repair and recombination proteins [BR:
pmj03400
]
P9211_16051 (rpoC2)
Enzymes [BR:
pmj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P9211_16051 (rpoC2)
Transcription machinery [BR:
pmj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P9211_16051 (rpoC2)
DNA repair and recombination proteins [BR:
pmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P9211_16051 (rpoC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ABX09536
UniProt:
A9BCH4
LinkDB
All DBs
Position
complement(1430366..1434466)
Genome browser
AA seq
1366 aa
AA seq
DB search
MTSTSPKSRRSSGKGRKGSKKKGKQVSQIPPLSKTPPSFRNRIVDKKALKQLVAWAYKNH
GTAVTAAMADNLKDLGFKYATQAAVSISVDDLKVPDAKQDLLGEAEQQITATEECYRLGE
ITEVERHTKVIDTWTETNERLVDAVKKNFNQNDPLNSVWMMANSGARGNMSQVRQLVGMR
GLMANPQGEIIDLPIRTNFREGLTVTEYVISSYGARKGLVDTALRTADSGYLTRRLVDVA
QDVIVREEDCGTSRAILVKAEDGRFGNRLVGRLTAEQIVGDADEIIAKKDTAIDPELSKK
IEKAGLAGIMVRSPLTCEATRSVCRKCYGWALAHNNLVDLGEAVGIIAAQSIGEPGTQLT
MRTFHTGGVSTAETGVVRSTIAGKVEFGPNARVRGYRTPHGVEAQQAEVDFTLKVKPTGS
GKTQTIEISNGSLIFVDNAQEIAADVTVAQITAGAVKKSVEKATKDVICDLAGQVRYESV
IQPREVTDRQGNITLKAQRLGRLWVLAGDVYNLPPNARPVVKANSKVSKGMVLAEASQAS
EFGGEVRLRDSIGDSREVQIVTTSMTLKDFKLLEESTHTGEIWNLEAKDGTRYRLNSIPG
SKISSGEIVAELADDRFRTKTGGLVKYAPGLAIKKARSAKNGFEVSNGGTLIWVPQETHE
INKDISLLMIKDRQWIEAGTEVVKDIFSQTAGIVTVTQKNDILREIIVRSGEFHLCNESK
VLERFEDEGQMVNPGENIAKGLKADSMVLVQTVESRDGKGLLLRPVEEYTIPDQAQLPEL
SHVKQEKGPSLGLRATQRLAFKDGELIKSVEGVELLKTQLILDTFETTPQMTVDVEVALD
KRAKTINRLRLVILESILVRRDTMSDSSHGSTHTELQIKDNQLVNADDVVATTQILCKED
GIVQLPNAVDDEPIRRLIVERAQDTTVLTAKDNPILKVGERVVDGDLLSKGEPINCCGEV
EDIKGNKVTLRLGRPYMVSPDSVLHVRDGDLVQRGDGLALLVFERQKTGDIVQGLPRIEE
LLEARRPRESAILCKKPGIVEIKQEEDDESVVVKVIESDDSLSEYSILLGRNVMVSDGQE
VHAGEFLTDGPVNPHELLECFFGDLRDRKPLLEAAQESIAKLQHRLVTEVQNVYKSQGVS
IDDKHIEVIVRQMTSKVRIEDAGDTTLLPGELIEIRQVEDTNQAISVTGGAPAEFTPVLL
GITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFSGFV
EELRAEAGPHPDILAEDPAGYRRMQNLRPDYTVEMPVSTAAKSTSVLDDPSEEDLEATRS
RHGIDPTTSNFAAFARPSGDDPSQEDQKPDPIALEGLQEEGLLADE
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaacttctccaaaatctcgtagatcttcaggcaagggcaggaagggtagcaag
aagaaaggtaagcaggtaagtcaaataccacctctttccaaaacacctccctcttttaga
aaccgtatagtcgataagaaagctttaaaacagttagtagcttgggcctataaaaatcat
ggaacagcagttactgctgccatggcagataatcttaaagatcttggctttaagtacgca
actcaagcagcggtctctatctctgttgatgacttaaaggttccagatgcaaaacaggat
ttacttggagaagcggagcagcaaatcactgctacagaagagtgttaccgccttggagaa
attactgaagttgaacgtcatacgaaagtgattgatacctggactgaaacgaatgagaga
ttggttgatgcagtcaaaaagaatttcaatcaaaacgaccctctgaattctgtatggatg
atggccaactctggcgcaagaggaaacatgtctcaagtacgtcaactggtaggcatgaga
ggtttaatggctaacccccaaggtgaaattattgacttgcctattcgcactaattttaga
gagggtttaacagtaactgaatatgttatttcttcttatggtgcacgtaaaggtcttgtt
gacactgccttaagaacggctgactctggatatttgacaagacgtctagtcgatgtggcg
caagatgtaatagtgcgagaggaagattgtggaaccagtagagcgatattagtaaaagct
gaggatggacgttttgggaataggcttgtgggacgtttaacagcagagcaaatcgttggt
gacgctgacgaaataatagctaagaaggatacggcaatcgaccctgaattgtctaagaag
attgaaaaagcaggtttagcaggaattatggtgcgatctcctttgacttgtgaggcgact
cggtctgtttgtagaaagtgttatggatgggctttggctcataataatttggttgatctt
ggagaagcagtagggattattgcagcacagtcaattggagagcctgggactcaattaaca
atgagaactttccatacaggaggggtatccactgcggaaacaggtgtagtgaggtcaact
attgcagggaaggttgagtttggacctaatgcgcgtgtgcgtggctatagaactcctcat
ggagttgaagctcagcaagccgaagttgactttaccttgaaagttaaacccacaggaagt
ggtaagactcaaactattgaaatttcaaatggttcattgatctttgtagataatgcacaa
gagatagccgctgatgtcacagttgctcagataacagcaggagctgtgaagaagagtgtt
gagaaagcgactaaagatgttatttgtgacttagctggacaggttagatatgaaagtgtg
atccagcctagagaagtaactgatagacagggcaatatcactttgaaggcacaacgactc
ggacgactttgggtcttggcgggagatgtatacaatttacctcctaatgcacgtccagtt
gttaaggctaactctaaagtctccaaaggaatggtcttggcagaagcgagtcaagctagt
gagtttggaggagaagttcgtttgcgagattctattggagattctcgagaagtacagata
gtcacgacatctatgactttgaaggattttaaactactagaagagtcgactcatacaggt
gagatatggaatttagaggctaaagatggtacaagatatcgtctcaactctatcccaggt
agcaagattagtagcggggagatcgtagctgaactagcagatgaccgattccggacaaag
acaggtggactagttaaatatgcaccgggactagctatcaaaaaggcaaggtcagcgaaa
aacggttttgaagttagcaatggtggaactttgatctgggttcctcaagaaacacatgaa
attaacaaggatatttctttgctaatgattaaagatcgccagtggatagaagctggaact
gaagttgttaaggatattttcagccaaactgctggaatagtgactgtcactcaaaagaat
gacattttgagagagattattgttcgtagcggcgagtttcacctttgtaatgagtcaaaa
gttctagaacgttttgaggatgaagggcagatggttaaccctggtgagaatatcgctaaa
ggacttaaggctgattcaatggtccttgttcaaacagtggaatctagagatggaaaaggt
cttttactaagaccagttgaagagtacacaattccagatcaagcccaattacctgaactt
tcacatgttaagcaagagaaaggtccttctctaggactgagggcgacccagagacttgcc
tttaaagatggtgagcttattaagtctgtggagggtgtggagttattgaaaacccaatta
atcctggacacttttgaaacgacccctcaaatgactgtagatgttgaggtggctttagat
aagcgagctaaaacaattaacagattaagactagtaatcctagaaagtatcttggttaga
cgagacaccatgtctgattcaagtcatggatctactcatacagagctacaaattaaagat
aatcaactagtgaatgctgatgatgtagtcgcaacaacacagattttatgtaaggaagat
ggaattgttcaactaccaaatgccgtagacgatgaacctatacgtcgactgattgttgag
cgtgctcaagatactactgttttgactgctaaagacaaccctatcctcaaggtaggtgaa
agggttgtcgacggggatttattgtctaaaggagagccaattaattgttgtggagaagtt
gaagatattaaaggaaataaggtaacacttcgtcttggtagaccttatatggtctctcca
gattctgtacttcacgtacgagatggggatttagttcaacgtggagatggcttggcttta
ttggtatttgaaagacaaaaaactggagacattgttcaaggattaccaagaattgaggaa
ttattagaggcacgaaggccaagagaatcagcaattctttgtaaaaaacctggtatagtt
gagataaaacaagaagaggatgatgaatctgtagtagttaaagttatagaaagcgacgac
tctttatccgaatattcgatccttctcggtaggaatgtcatggttagtgatgggcaagaa
gtacatgcaggagaattccttactgatggcccagttaatcctcatgaattgcttgagtgt
ttctttggtgatcttcgagatagaaagcctttgttggaagctgcccaagaatcaatagca
aaattgcagcatcgactagttactgaggtccagaatgtttataagtcccagggcgtctca
attgatgacaagcatattgaggttatagttcgtcagatgaccagtaaggttcgtatagaa
gatgctggagatacaactttacttcctggagagttaattgagattcggcaagttgaagat
accaatcaagcaatctctgtgactggaggtgctccggcagagtttactccggttctttta
ggtataacgaaagcttctttgaatacggatagctttatttctgccgcttctttccaagaa
accactagggttctgacggaggcagcaatagaaggtaaatcggattggctaagagggtta
aaagagaatgtgattattgggcgacttattccagctggaacaggctttagtggttttgta
gaagaactgagagccgaggctgggccgcatccagatattttggctgaagatccagcaggt
tatagacgtatgcaaaatctaagacctgactatacagttgaaatgcctgtatctactgct
gcaaaatcaacctctgtattagatgacccgagcgaggaagatttagaggccactaggagt
aggcatggaatagatccaaccactagtaattttgcagcatttgctcgtccttcaggagat
gatccatctcaagaagatcaaaaacctgacccaattgctttagaggggctgcaagaggag
ggattgcttgcagatgaataa
DBGET
integrated database retrieval system
