Prochlorococcus marinus MIT 9211: P9211_16061
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Entry
P9211_16061 CDS
T00616
Symbol
rpoC1
Name
(GenBank) RNA polymerase gamma subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pmj
Prochlorococcus marinus MIT 9211
Pathway
pmj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P9211_16061 (rpoC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmj03021
]
P9211_16061 (rpoC1)
03400 DNA repair and recombination proteins [BR:
pmj03400
]
P9211_16061 (rpoC1)
Enzymes [BR:
pmj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P9211_16061 (rpoC1)
Transcription machinery [BR:
pmj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P9211_16061 (rpoC1)
DNA repair and recombination proteins [BR:
pmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P9211_16061 (rpoC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Fas_alpha_ACP
Motif
Other DBs
NCBI-ProteinID:
ABX09537
UniProt:
A9BCH5
LinkDB
All DBs
Position
complement(1434513..1436414)
Genome browser
AA seq
633 aa
AA seq
DB search
MTNSNLRTENHFDYVKITLASPERVMSWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGL
FCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVSHVWY
LKGIPSYVAILLDMPLRDVEQIVYFNCYVVLDQGDHKDLKYKQLLTEDEWLEIEDEIYAE
DSTIENEPVVGIGAEALQQLLEDLDLKEIAETLREEITGSKGQKRAKLIKRLRVIDNFIA
TNARPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPE
IIVRNEKRMLQEAVDALVDNGRRGRTVVGANNRALKSLSDIIEGKQGRFRQNLLGKRVDY
SGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQRADDEVM
QVLQEVIDGHPILLNRAPTLHRLGIQAFEPKLVDGRAIQLHPLVCPAFNADFDGDQMAVH
VPLAIESQTEARMLMLASNNILSPATGEPIVTPSQDMVLGSYYLTAIQPEASKPDFGDQS
KTFASLDDVINAFEDKRIKLHDWVWVRFNGEVDDDDHGEPSHSETLEDGTRIEQWNLRRD
RLDEQGALISRFVLTTVGRVVMNHTIIDAVAIA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgactaacagcaaccttcgcactgagaaccattttgattacgtcaaaattactttagct
tctcctgaaagagtaatgtcatgggggcaacgtactctacctaatggacaagttgttgga
gaagtaacaaagccggaaacgataaattatcgaactttaaaacctgagatggatggactg
ttctgtgaaaagatctttggtccttcaaaagattgggaatgtcattgtggcaaatataag
cgtgttcgccatcgtgggattgtttgcgaacgatgtggtgtagaagtcactgaaagtagg
gttcggcgtcatagaatggggtttatcaaactagcggcacctgtatctcatgtttggtat
ttaaaaggcatcccaagttatgttgctattttgcttgatatgcctcttagagatgttgag
cagatagtttattttaattgctatgtagtcttagaccaaggcgaccataaagatcttaag
tacaagcaattattgaccgaagatgaatggttggaaatcgaggatgagatctatgctgaa
gactctactattgagaatgaacctgtagtggggattggggctgaagctctgcagcaactt
cttgaagatttagatttaaaggaaatagctgaaactctgagagaggaaatcactggtagc
aagggacaaaaaagagcaaaattaattaaaagactcagagtaatagataactttattgct
acaaatgctcgtccagagtggatggtactagatgcaattcctgttattccaccggacctt
agacctatggtccaattagatgggggtagatttgctacctctgatttaaatgatctttat
agacgggttattaataggaataatcggttagctcgcttacaggaaatacttgcaccagaa
attattgttaggaatgagaagaggatgcttcaggaagctgttgatgctctggtagacaat
ggtcgacgaggtagaacggttgttggcgcaaataatcgtgctttaaaatctctgagcgat
ataattgaaggaaagcaaggtcgttttcgacagaacctgctaggaaagagagttgattat
tcaggtagatctgtaatagtggttggtccaaagttaaagatgcatcaatgtggattacct
aaggagatggctatcgagcttttccagccttttgtaattcacaggcttatacgtcaaaac
attgtgaataatattaaggcggctaagaaacttattcagagagcagatgatgaagttatg
caggttcttcaagaagttatagatggccatccaattttgttaaatagagcacctactttg
cacagactcggcatacaagcttttgagccaaaattagttgatggtagggcaatacaactt
catccgttggtttgtcctgcattcaatgctgattttgatggcgaccagatggcagtccat
gtcccattggctatagaatctcaaaccgaggcccgaatgttgatgctggcaagcaataac
attctttctccagccactggggaaccaatcgtaactccttctcaagatatggttttaggg
tcatattatctaactgccattcaaccggaggcatcaaaaccagattttggggatcaatcc
aaaacctttgcttctttagatgatgtaattaatgcttttgaggataaaagaataaagctg
catgattgggtttgggtaagatttaacggtgaagtagatgatgatgatcatggagagcca
tctcactcagagactctggaagatgggactcgtatagaacagtggaatttaagacgtgat
cgcttggacgagcagggtgccctaatcagtagatttgttcttactactgttggccgtgta
gtaatgaatcacaccattattgatgctgttgcaatcgcttaa
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