Ectopseudomonas mendocina NK-01: MDS_0170
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Entry
MDS_0170 CDS
T01473
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk03030
DNA replication
pmk03410
Base excision repair
pmk03420
Nucleotide excision repair
pmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MDS_0170
03410 Base excision repair
MDS_0170
03420 Nucleotide excision repair
MDS_0170
03440 Homologous recombination
MDS_0170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmk03032
]
MDS_0170
03400 DNA repair and recombination proteins [BR:
pmk03400
]
MDS_0170
Enzymes [BR:
pmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MDS_0170
DNA replication proteins [BR:
pmk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MDS_0170
DNA repair and recombination proteins [BR:
pmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MDS_0170
NER (nucleotide excision repair)
GGR (global genome repair) factors
MDS_0170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AEB56201
LinkDB
All DBs
Position
180304..183186
Genome browser
AA seq
960 aa
AA seq
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MVTLLLVFNDAAILPLHPPKRLIPRMSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGA
VKGVLNMLKSLRKQYPDSPFAVVFDAKGGTFRDELFAEYKANRPSMPDELRVQVEPLHAS
VRALGLPLLCVEGVEADDVIGTLARQAAGEKRDVVISTGDKDMAQLVCPHVTLVNTMTGS
VYDADGVKEKFGVGPELIIDYLALMGDKVDNIPGVPGVGEKTALGLLVGVGGGLDVLYAN
LDKVPELPIRGAKGLPAKLEEHREMAYLSYQLATIKTDVPLNIEIDSLHPGEPDQAALVE
LYGQLEFKNWLDDLLRQNKALAAKAAAPAGDLFAEPTGEAVEEAAEEAAEPAPASAGDYQ
LVLEQAQLDAWLQKLKQAELIAFDSETTSIDAQQAQLVGLSFAVKAGEAAYIPLAHSYMG
VPQQLDRDAVLNALKPILEDPAKAKVGQHAKYDINVLANASTPIMVQGVAFDTMLESYVL
DSTATRHDMDSLALKYLNHSTIRFEDIAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLH
QELWGRLEAIPSLAKVLRDIEIPLVPVLARIERNGALVDAKLLGEQSVELGEKLVELERK
AFEIAGEEFNLASPKQLGVILYEKLGYPVISKTAKGQPSTAEAVLAELAEQDYELPKVLM
QYRSLSKLKSTYTDKLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPIRTAEGRR
IRQAFVAPKGYKLMAADYSQIELRIMAHLAKDEGLLDAFRYDLDVHKATAAEVFGVPLDQ
VTSDQRRKAKAINFGLIYGMSAFGLAKQIDVERKEAQAYIDRYFARYPGVLTYMESTRAQ
AAEQGYVETVYGRRLYLPEIHAQNQAMRKGAERAAINAPMQGTAADIIKRAMIAVDGWLQ
DSGIDARIILQVHDELVLEVREELINEVSAKLKSLMSGAADLDVPMLVEVGVGANWDEAH
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccttgctccttgtattcaatgatgcagccattctaccgctgcacccgccgaaa
aggttgatcccgcgcatgagccaagctcccctcgttctggtcgacggttcctcgtacttg
taccgcgccttccacgccctgccgccgctgaccacttccaagggcatgcccaccggagcg
gtgaagggcgtgctgaacatgctcaagagcctgcgcaaacagtacccggacagccccttt
gccgtggttttcgacgccaagggcggcaccttccgcgatgagctattcgccgagtacaag
gccaatcgcccgtcaatgccggacgagttgcgcgtccaggtcgaaccgctgcacgccagc
gtgcgcgctttggggttgccgctgctgtgcgtcgaaggcgtcgaagccgatgacgtgatc
ggtaccctggcccgtcaggcagccggggaaaagcgcgacgtggtcatctccaccggcgac
aaggacatggcgcagctggtctgcccgcacgttacgctggtcaacaccatgaccggaagc
gtctacgacgccgatggcgtaaaggagaaattcggtgtcggccctgagctgatcatcgac
tacctggcgttgatgggtgacaaggtcgacaacatccccggtgtacccggtgtgggtgaa
aaaaccgccctcggcctgctggtcggcgtcggcggcggcctcgacgtgctctacgccaac
ctcgacaaggtgcccgagctgccgatccgcggcgccaagggcctgccggccaagctcgaa
gagcaccgcgagatggcctacctgtcgtatcagttggcgaccatcaagaccgacgtaccg
ctgaatatcgagatcgactcgctgcatccgggcgagccggatcaggctgctctggttgaa
ttgtatggccagctggaattcaagaactggctggacgacctgctgcgccagaacaaggcg
ctggccgccaaggctgctgcgccggctggcgatctgttcgctgagccgactggcgaagcc
gtcgaagaggctgccgaagaggctgccgagccggcgccagccagcgccggtgattaccaa
ctggtgctggagcaggcgcagctcgacgcctggctgcagaagctgaagcaggccgagctg
atcgccttcgacagcgaaaccaccagcatcgacgcccagcaggcgcaactggtcggcctg
tccttcgcggtcaaggccggcgaagcggcctatatcccactggcgcacagctacatgggc
gtgccgcagcagctcgatcgtgatgcggtgctcaacgcgctcaagccgatcctcgaagat
cctgccaaggccaaggttggccagcacgccaagtacgacatcaacgtcctggccaatgcc
agtacgccgatcatggtgcagggcgtggccttcgacaccatgctcgagtcctacgtgctg
gactccaccgccacccgtcacgacatggacagcctggcgctgaagtacctgaaccacagc
accattcgcttcgaagatatcgccggcaagggcgccaagcaactgaccttcgaccagatc
gccctggagcaggccggcccctacgctgccgaagacgctgatgtgaccctgcgtttgcac
caggaactgtggggccgcctcgaggccataccgtcgctggccaaggtgctacgcgacatc
gagatcccgctggtgccggtgctggcgcgcatcgagcgcaacggcgccttggtcgatgcc
aagctgctcggtgaacagagcgtcgagctgggcgagaaactggtcgagctggagcgcaag
gcgttcgagatcgccggtgaggaattcaacctcgcctcgcccaagcagctcggcgtgatc
ctctatgaaaaactcggctacccggtgatcagcaagaccgccaaggggcaaccttccacc
gccgaggcggtgctagccgaactggcagagcaggactacgagctgcccaaggtgctgatg
cagtaccgcagcttgagcaagctcaagagcacctacaccgacaagctgccggagcagatc
aacccgcgtaccgggcgcatccacaccagttaccaccaggcggtggccgccaccggccgc
ctgtcctccagcgacccgaacctgcagaacattccgatccgcaccgccgaaggtcggcgc
atccgccaggctttcgtggcgcccaaaggctacaagctgatggcggcggactactcgcag
atcgagctgcgcatcatggctcatctggccaaggatgaaggtctgctggacgccttccgc
tatgatctggacgtgcacaaggccacggctgccgaagtgttcggtgtgccgctggatcag
gtcaccagtgatcagcggcgcaaggccaaggccatcaacttcggcctgatctatggcatg
agtgccttcggcctggccaagcagatcgacgtcgaacgcaaggaggcgcaggcctacatc
gaccgctacttcgcacgctatcccggcgtactgacctatatggaaagcacccgcgcccag
gccgccgagcagggctacgtggagacggtctacggccgtcgcctgtacctgccggaaatc
catgcgcagaaccaggccatgcgcaagggcgccgagcgcgcggcgatcaacgcgccgatg
caaggcactgcggcagatatcatcaagcgcgcgatgattgccgtggacggctggctgcag
gacagcggtatcgatgcgcgcatcatcctgcaggtgcacgatgaactggtgctggaggtg
cgcgaggaactgatcaacgaggtcagtgccaaactcaagagcctgatgagtggcgccgcc
gacctggacgtgccgatgctggtggaagtgggcgtcggtgccaattgggatgaggcccac
tga
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