Ectopseudomonas mendocina NK-01: MDS_0205
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Entry
MDS_0205 CDS
T01473
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk02020
Two-component system
pmk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MDS_0205
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MDS_0205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmk03021
]
MDS_0205
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pmk02035
]
MDS_0205
Transcription machinery [BR:
pmk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MDS_0205
Bacterial motility proteins [BR:
pmk02035
]
Flagellar system
Flagellar assembly proteins
Stator
MDS_0205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_38
UPF0122
GerE
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
AEB56236
LinkDB
All DBs
Position
219179..219913
Genome browser
AA seq
244 aa
AA seq
DB search
MNANCAIDYRYAAEQGGAALFAPGAEQKWLLQYLPLVKRIVSQLALQANQVLDREDMEQI
GLMGLLECLRRYGTPDEQFGRFAALRIRGAILDELRRQDWRPRQVRQQTHKIRDAIRQLA
RQLGRAPQEEEILQAAGINAKEYQEFLQADACEAIESLDELLQNGHEGFACGGSAVEERV
LKERLLTQALSQLSERERLVLTLYYQHELSLKEIALVLELSDARVCQLSKQAIAKASRYL
NERG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaactgcgccatcgactaccgctacgccgctgaacagggcggtgccgcgctg
ttcgccccaggggccgagcagaagtggctgttgcagtacctgccgctggtcaagcgcatc
gtcagccagctggcgctgcaggccaaccaggtgctcgaccgcgaggacatggagcagatc
ggtctgatggggctgctcgaatgtctgcgtcgctacggtacgccggacgagcagtttggg
cgtttcgccgcgttgcgcatacgtggcgcgatcctagatgaactgcgtcgccaggactgg
cggccgcgtcaggtgcgtcagcagacgcacaagatccgcgatgccattcgccagctggcg
cggcagctgggccgtgcgccgcaggaagaagagatcctccaggcggccggcattaacgcc
aaggaataccaggagtttctccaggccgacgcctgcgaagccatcgaaagcctcgatgaa
ctgctgcagaacggccatgagggcttcgcctgtggcggcagcgcggtcgaggagcgcgtg
ctcaaggagcgtttgctgacccaggcgctgagccagctcagcgaacgcgagcgtctggtg
ctgaccctttactaccaacacgagctgagcctcaaggaaatcgccctggtgctggagctg
agcgacgcgcgcgtctgccagttgagcaagcaggcgattgccaaggccagccgttacctg
aacgagagaggctag
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integrated database retrieval system
