Ectopseudomonas mendocina NK-01: MDS_0321
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Entry
MDS_0321 CDS
T01473
Name
(GenBank) site-specific tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmk03036
]
MDS_0321
Chromosome and associated proteins [BR:
pmk03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
MDS_0321
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AEB56352
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All DBs
Position
complement(342069..342965)
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AA seq
298 aa
AA seq
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MHDRLDAYLEHLRRERQVSVHTLDGYRRDLGKVLAFCEAEGLSDWAELDTRNLRRLVARL
HQQGLSSRSLARLLSATRGLYQYLLREGLCRHDPATGLSPPKRERRLPRTLDADRSAQLL
DGAVEDDFIARRDQAMLELFYSSGLRLSELVGLDLDGLDLPAGLIRVRGKGNKVRELPVG
SLARQALEQWLPLRKLANPSDGAVFISQQGRRLGPRAVQLRVHQAGVRELGQHLHPHMLR
HSFASHMLESSQDLRAVQELLGHADIATTQIYTHLDFQHLANVYDQAHPRAKRKGGSE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatcgactcgacgcctacctcgaacacctgcgccgcgagcgccaggtgtcggtg
cataccctcgacggctatcgccgtgacctcggcaaggtgctggcattctgcgaagccgaa
ggcctgagcgactgggccgagctggatacccgcaacctacgccgcctggtcgcccgcctg
catcagcaaggcctgtccagccgcagcctggcacgtctgctctcggccacccgcggcctc
tatcaatatctgttgcgtgaaggcctgtgccgccacgacccggccaccggcctcagcccg
cccaagcgcgaacgccgcctgccgcgcacgctggatgccgaccgcagcgcacaactgctc
gacggcgcggtggaggacgacttcatcgcccgccgtgaccaggccatgctcgaattgttc
tattcctcggggctgcgcctgtccgagctggtcggccttgatctcgacgggctggacctg
ccagccggtctgatacgcgtacgtggcaagggcaacaaggtgcgcgaactgccggtcggc
agcctggcgcgccaggcgctggagcagtggttgccgttacgcaagctggccaacccgagc
gacggtgcggtgttcatcagccagcagggccgccgcctcgggccgcgtgcggtgcagctg
cgcgtgcatcaggccggcgtacgcgagctcggccagcatctgcatccgcacatgctgcgc
cacagcttcgccagccatatgctggagtcctcgcaggatctgcgcgccgtacaagagttg
ctcggtcacgccgatatcgccaccacgcagatctacacccacctggatttccagcacctg
gccaatgtctatgaccaggcccaccccagggccaaacgcaaaggcggttccgaatga
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