KEGG   Ectopseudomonas mendocina NK-01: MDS_0340
Entry
MDS_0340          CDS       T01473                                 
Name
(GenBank) porphobilinogen deaminase
  KO
K01749  hydroxymethylbilane synthase [EC:2.5.1.61]
Organism
pmk  Ectopseudomonas mendocina NK-01
Pathway
pmk00860  Porphyrin metabolism
pmk01100  Metabolic pathways
pmk01110  Biosynthesis of secondary metabolites
pmk01120  Microbial metabolism in diverse environments
pmk01240  Biosynthesis of cofactors
Module
pmk_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
pmk_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    MDS_0340
Enzymes [BR:pmk01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.61  hydroxymethylbilane synthase
     MDS_0340
SSDB
Motif
Pfam: Porphobil_deam Porphobil_deamC LysR_substrate SBP_bac_3
Other DBs
NCBI-ProteinID: AEB56371
LinkDB
Position
357990..358928
AA seq 312 aa
MSREIRIATRKSALALWQAEYVKARLEQAHPGLKVSLVPMVSRGDKLLDAPLAKIGGKGL
FVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDALPA
GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFAD
RIRSSISAEDSLPAGGQGAVGIECRSADSDVHALLAPLHHRETALRVTAERALNKHLNGG
CQVPIACYALLEDDQLWLRGLVGQPDGGLLLRAEERAASGDAEALGVRVAEALLAQGADA
ILKAVYGEAGHP
NT seq 939 nt   +upstreamnt  +downstreamnt
atgtcccgcgaaattcgcatcgccacccgtaagagcgccctggccctgtggcaggccgaa
tatgtcaaagcccgtctggagcaggcccaccctggcctgaaggtcagcctggtgcccatg
gtcagccgcggcgacaagttgctcgacgcgccgctggcgaaaatcggtggcaaggggctg
ttcgtcaaggaactggaaaccgcgctgctggaaaacgaggccgacatcgccgtgcactcg
atgaaagacgtaccgatggacttccccgaagggctgggcctgtactgcatctgtgagcgt
gaagatccgcgtgacgccttcgtctccaatacctacgacagcctcgatgcgctgccagcc
ggcagcgtggtcggcacctccagcttgcgccgccaggcccaattgctggcacgccggccc
gatctgaaaatccagttcctgcgcggcaacgtcaatacccgcctggccaagctcgatgcc
ggcgagtacgacgccatcatccttgccgctgccggcctgatccgcctgggcttcgcagat
cgcatccgcagctcgatcagcgccgaagacagcctgccggccggcggccagggcgccgtt
ggcatcgaatgccgcagcgccgacagcgacgtacacgccttgctggcgcccctgcatcac
cgtgagaccgcgttgcgcgtcaccgccgaacgggcgctgaacaaacacctcaatggcggc
tgccaggtgcctatcgcctgctatgcgctgctcgaggacgaccagctgtggctgcgcggc
cttgtcggccaacccgacggggggctgttgctgcgcgccgaagagcgcgctgccagtggt
gatgctgaagccctgggggtgcgtgtcgccgaggcactgctggcgcagggcgccgatgcc
attctcaaggccgtctacggtgaggccggtcacccttga

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