KEGG   Ectopseudomonas mendocina NK-01: MDS_0422
Entry
MDS_0422          CDS       T01473                                 
Name
(GenBank) SSU ribosomal protein S6P modification protein
  KO
K05844  ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
pmk  Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmk03009]
    MDS_0422
Ribosome biogenesis [BR:pmk03009]
 Prokaryotic type
  ribosomal protein modification factors
   MDS_0422
SSDB
Motif
Pfam: RimK Rimk_N GSH-S_ATP ATPgrasp_ST ATP-grasp_3 Dala_Dala_lig_C LysX_preATP_grasp ATP-grasp_2 R2K_3
Other DBs
NCBI-ProteinID: AEB56453
LinkDB
Position
complement(446610..447515)
AA seq 301 aa
MKIAVLSRNPRLYSTRRLVEAGQQRGHEMVVIDTLRAYMNIASHKPQIHYRGQAMEGFDA
VIPRIGASVTFYGCAVLRQFEMMGVYPLNESVAISRSRDKLRALQLLSRKGIGLPVTGFA
HSPDDIPDLIQMVGGAPLVIKVLEGTQGMGVVLAETAKAAESVIEAFLGLKQDIMVQEYI
QEAGGADIRCFVVGDKVIAAMKRQAKAGEFRSNLHRGGTASLIKITPEERMTAVRAAKVM
GLNVAGVDILRSNHGPLVMEVNSSPGLEGIETTTGKDVAGMIIQYLEKNAEPGQTRTKGR
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaagatcgccgtgctgtcgcgcaacccgcgtctgtattccacccgccgcctggtggag
gccggtcagcagcggggccatgaaatggtggtgatcgacaccctgcgcgcctatatgaac
atcgccagccacaagccgcagatccattatcgcggccaggccatggagggcttcgatgca
gtgatcccacgcatcggcgcctcggtgaccttctatggctgcgcggtgttgcgccagttc
gagatgatgggtgtttacccgctcaacgagtcggtggccatcagccgctcgcgcgacaag
ctgcgcgccctgcaattgctgtcacgcaagggcatcggcctgccagtgaccggtttcgcc
cactccccggacgacatccccgacctgatccagatggttggcggtgcgccgctggtgatc
aaggtgctggaaggcacccagggcatgggcgtggtgctggccgaaacggcaaaggccgcc
gagtcggtgatcgaggccttcctcggcctcaagcaggacatcatggtccaggaatacatc
caggaggctggaggtgccgacattcgctgcttcgtggtcggtgacaaggtgatcgcggcg
atgaagcgccaggccaaggccggtgaattccgctccaacctgcaccgtggcggcactgcc
agcctgatcaagatcaccccggaagaacgcatgaccgcagtacgcgcagccaaggtcatg
ggccttaacgtcgccggggtggatatcctgcgctccaatcacggcccgctggtgatggag
gtcaactcctcgccgggtcttgaaggcatcgagaccacaaccggcaaggacgtcgccggg
atgatcatccagtatctggaaaagaacgccgaacccggtcagacccgcaccaagggccgc
ggatga

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