Ectopseudomonas mendocina NK-01: MDS_0536
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Entry
MDS_0536 CDS
T01473
Name
(GenBank) transcriptional regulator
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmk03000
]
MDS_0536
Transcription factors [BR:
pmk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MDS_0536
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
Put_DNA-bind_N
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
AEB56567
LinkDB
All DBs
Position
complement(576537..577484)
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AA seq
315 aa
AA seq
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MPQIFCFLLLPGFSMMGLMSAIEPLRVANRFRGELYRWRLLSRDGNAVQASNGMSLNVDG
ALELPEATRALFVVAGFEPLAHYDHHLAHWLQRREPELAVLGGIDTGSFVLAEAGLFQHQ
RLTLHWEAIDAFRERYPALLVTQELFEIDGKRITSAGGTSSLDLMLGLIGQEHGETLAVQ
VSEQFVVSRIRTRLDHQRMQVASRYDLHNKKLVRVIGEMERQGEQPLSSEALAEQVGISV
RQLERLFRHHLDTTPSAFYLDLRLDKARQLLRQSDLSVLEVGLACGFDSASYFSRSYRRR
FAASPSQDRRERSNS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgccccagatcttctgtttcctgctgctgcccggtttttccatgatgggactgatgtcg
gccatcgagccgttgcgcgtggccaatcgctttcgcggcgagctgtatcgctggcgcttg
ctcagccgggacggtaacgccgtgcaggcgagcaacggcatgtcgctgaacgtcgatggc
gcactggaacttccggaagcaacccgcgcgctgttcgtggtggccggtttcgagccattg
gcacactacgaccatcacctcgcgcactggctgcaacggcgcgagccggagctggctgta
cttggcggcatcgacacgggcagcttcgtgctggccgaggccgggctgttccagcaccag
cgcctgacccttcattgggaagccatagatgcctttcgcgagcgctacccagcgctactg
gtgacccaggaactgttcgaaatcgacggcaagcgcatcaccagtgcaggcggtaccagc
agcctggatctgatgctggggctgatcggccaggaacacggcgagacgcttgcggtgcag
gtgtcggaacagttcgtggtcagccggatccgcacgcgcctggatcaccagcgcatgcag
gtggccagccgctacgacctgcacaacaagaagctggtgcgggtgatcggcgagatggag
cgccagggcgaacaaccactgtccagtgaggcactggccgagcaggtaggtatcagcgtg
cgtcagctggaacgcctgtttcgccatcatctggacaccacgccatcggccttctacctc
gacctgcgcctggacaaggcgcgccaattgctgcgccagagcgacctcagtgtgctggag
gtgggcctggcgtgcggcttcgactcggcctcctacttctcgcgcagctaccgcaggcgc
ttcgccgccagccccagccaggatcgccgcgagcggtcaaacagctag
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integrated database retrieval system
