Ectopseudomonas mendocina NK-01: MDS_0825
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Entry
MDS_0825 CDS
T01473
Name
(GenBank) nitrate-inducible formate dehydrogenase, beta subunit
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00630
Glyoxylate and dicarboxylate metabolism
pmk00680
Methane metabolism
pmk01100
Metabolic pathways
pmk01120
Microbial metabolism in diverse environments
pmk01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MDS_0825
09102 Energy metabolism
00680 Methane metabolism
MDS_0825
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Gene cluster
GFIT
Motif
Pfam:
Fer4_11
Form-deh_trans
Fer4_7
Fer4_9
Fer4_10
Fer4_6
Fer4_2
Fer4_21
Fer4
Fer4_4
Fer4_17
Fer4_3
Fer4_8
Fer4_15
Fer4_16
Fer4_22
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
AEB56856
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Position
910113..911039
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AA seq
308 aa
AA seq
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MASQDIIARSATTTPMPSVRQVGEVAKLIDVSKCIGCKACQVACSEWNDLRDEVGQNHGT
YDNPTDLTASSWTVMRFTEHEDEAGKLEWLIRKDGCMHCAEPGCLAACPSPGAIIQYANG
IVDFNQDKCIGCGYCITGCPFNIPRISQKDHKAYKCSLCSDRVAVGMEPACVKTCPTGAI
VFGTKEAMKEHADGRIADLKSRGYDNAGLYDPDGVGGTHVMYVLHHADQPSLYAGLPNEP
SISPLVSLWKGVTKPLGLLAMGATALIGFFHYIRVGRNRVEEDEPVTGDPAVHQVDPAVH
TYDPNQRP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacaagacatcatcgcccgctccgccaccaccacgccgatgccctccgtacgg
caggtcggcgaggtggccaagctcatcgacgtttccaagtgcatcggctgcaaggcctgt
caggtggcgtgctcggaatggaacgacctgcgtgacgaggtcggtcagaaccacggcacc
tacgacaacccgaccgacctcaccgccagctcctggacggtgatgcgcttcaccgaacac
gaggacgaagctggcaagctggaatggctgattcgcaaggacggctgcatgcactgcgcc
gagcctggctgcctggcggcgtgcccgagcccgggcgcgatcatccagtacgccaacggc
atcgtcgatttcaatcaggacaagtgcatcggctgtggttattgcatcaccggttgcccg
ttcaacatcccacgcatctcgcagaaggaccacaaggcctacaagtgcagcctgtgttcc
gaccgcgtagccgtaggtatggagccggcctgcgtgaagacctgcccgaccggcgccatc
gtcttcggcaccaaggaggcgatgaaggagcatgccgatgggcgcattgccgacttgaag
tcacgcggctacgacaacgccggcttgtacgatcctgatggcgtcggtggcacccacgtg
atgtacgtgctgcatcacgctgaccagccatcgctctatgccggcctgccgaacgagccg
agcatcagcccgctggtgtcgttgtggaagggcgtgaccaagccgctcggtctgctggcc
atgggcgccacggcgctgatcgggttcttccactacatccgcgtcgggcgcaaccgcgtg
gaggaggacgagcccgtgaccggtgaccctgccgtgcatcaggtcgacccggccgtgcac
acctatgatccgaaccagcggccgtag
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