Ectopseudomonas mendocina NK-01: MDS_0862
Help
Entry
MDS_0862 CDS
T01473
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00260
Glycine, serine and threonine metabolism
pmk00460
Cyanoamino acid metabolism
pmk00630
Glyoxylate and dicarboxylate metabolism
pmk00670
One carbon pool by folate
pmk00680
Methane metabolism
pmk01100
Metabolic pathways
pmk01110
Biosynthesis of secondary metabolites
pmk01120
Microbial metabolism in diverse environments
pmk01200
Carbon metabolism
pmk01230
Biosynthesis of amino acids
pmk01240
Biosynthesis of cofactors
pmk04981
Folate transport and metabolism
Module
pmk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MDS_0862
09102 Energy metabolism
00680 Methane metabolism
MDS_0862
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MDS_0862
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MDS_0862
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MDS_0862
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MDS_0862
Enzymes [BR:
pmk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MDS_0862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AEB56893
LinkDB
All DBs
Position
948961..950139
Genome browser
AA seq
392 aa
AA seq
DB search
MEMPNEQQLLAMAAARGAALRDGRVVLYAGANLPSAESQQAYAPELSAYPAMGPSYAKEQ
PDTDLVSGLEVAVRERICSLFGAAWAEPRLPSCTIANLAVFHAFSRPGDLLLAPAAAHGG
HLSQRRGGTPELAGLRVADLPFDTRACRLDAQAAAEQVRTLRPTLVMLGRSVVITPDDVE
PVVAAAREVGAKTIFDASHVSGLIAGGTFPNPLALGVDILTSSTYKTLPGRPHSLIAGRK
VEDGERLARFIDRALLANYDAGKLPSFLVTLQQAEADKGAYARRICRASETFAKVLRELH
VAVIAPNPGEVFTHQVLVPMSAVRDAPATIKALEQEGILVGTCNDPTTPGGYALRVGTQF
IVAQGQDEQVDNIARWLAAALRREPDGRMTVV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgcccaacgaacagcaactgctggcgatggcggctgcgcgcggcgcggcgctg
cgtgatggtcgcgtggtgctgtatgccggtgccaacctgcccagcgccgagtcgcagcag
gcctatgcccccgagctgagcgcctacccggcgatggggccgagttatgccaaggagcaa
ccggataccgacctggtgtcgggcctggaagtggcggtgcgcgagcgcatctgctcgctg
ttcggcgcggcctgggctgagccgcgcctgcccagctgtaccatcgccaacctggcggtg
ttccacgctttcagccggccgggtgacctgctgctggcgcctgccgcggcccatggcggg
cacctcagtcagcgccgcggcggcacgccggaactggccgggctgcgcgtggccgatctg
cctttcgatactcgcgcctgccgactggatgcccaggccgccgccgagcaggtgcgcacg
ttgcggccgactctggtgatgctcggccgctcggtggtcatcacgccggacgatgtcgag
ccggtggtggctgctgcgcgcgaagtgggcgccaagaccatcttcgacgcctcgcatgta
tcgggtctgatcgccggaggcaccttccccaatccgctggcgcttggggtcgatatcctt
accagttccacctacaagacgctaccggggcgtccgcacagtctgattgccgggcgcaag
gtcgaggacggtgagcgtctggcgcgtttcatcgaccgcgcattgttggccaactacgac
gctggcaagctgccgtccttcctggtcaccctgcaacaggccgaagcggacaagggcgcc
tacgcgcggcgcatctgcagagccagcgaaaccttcgccaaggtgctgcgtgagctgcat
gtggcagtgatcgcgccgaatccgggggaggttttcacccatcaggtgctggtgccgatg
agcgcggtgagggatgcacctgccacgatcaaggcgctggagcaggagggcattctggtc
ggcacctgcaacgacccgaccacgcccggcggctatgccctgcgtgtcggtacccagttc
atcgtggcccaaggccaggacgagcaggtggacaacatcgcccgctggctggccgctgca
ctgcgtcgtgagccggatggccgcatgaccgtggtttga
DBGET
integrated database retrieval system
