Ectopseudomonas mendocina NK-01: MDS_0868
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Entry
MDS_0868 CDS
T01473
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmk03400
]
MDS_0868
DNA repair and recombination proteins [BR:
pmk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MDS_0868
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
AAA_22
DnaB_C
SLFN-g3_helicase
GvpD_P-loop
AAA
Rad51
nSTAND3
RecA
AAA_24
AAA_14
NTPase_1
DUF7125
MCM
NB-ARC
AAA_29
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AEB56899
LinkDB
All DBs
Position
953501..954859
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AA seq
452 aa
AA seq
DB search
MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLVETVVEGATPSGRTGWAGDKANIKTLA
EVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAQRFPALY
VTGEESQQQVAMRARRLDLPQDKLKVMTETCIESIIATARQEKPKVMVIDSIQTIFTEQL
QSAPGGVAQVRESAALLVRFAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFEGES
DGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEAVPGSVVMATWEGS
RPMLVEVQALVDTSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTYDQDVFLNVVGGVK
VLETASDLALMAAVISSLRNRPLQHDLLVFGEIGLSGEIRPVPSGQERLKEAAKHGFKRA
IVPKGNAPKEAPPGLQIVAVTRLEQALDALFE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcaaaacgcatgtacggctgcaccgagtgcggcgccacctttcccaagtgg
gcgggacagtgtggtgagtgcggcgcctggaataccctggtggaaaccgtggtcgagggc
gccacgcccagcgggcgcaccggttgggctggcgacaaggccaatatcaagactctggcc
gaggtcagcgtcgaggaaattccgcgcttttccaccgcctccggcgaattggatcgtgtg
ctcggtggcggcctggtggatggctcggtggtgctgatcggcggcgacccaggcatcggc
aagtcgaccatcctcctgcagaccctgtgcaacatcgcccagcgctttccggcgttgtac
gtcaccggtgaggaatcgcaacagcaggtggccatgcgcgcgcggcgtctggacttgccg
caggacaagctcaaggtgatgaccgagacctgcatcgaatcgatcatcgccaccgcgcgg
caggaaaaacccaaggtcatggtgatcgattcgatccagaccattttcaccgagcaactg
caatcggcgccgggtggtgtcgcccaggtgcgcgagagcgcggcgctgctggtgcgcttc
gccaagcagagcggcacggcgatcttcctggtcggccacgtcaccaaggagggcgcgctg
gccggcccgcgcgtgctcgagcacatggtcgataccgtgctgtatttcgagggtgagtcc
gatggtcgtctacgcctgctgcgggcggtgaagaatcgcttcggtgcggtcaacgagctg
ggcgtgttcggcatgaccgacaagggcctcaaggaggtttccaacccctcggcgatcttt
ctcacccgcgctcaggaggcagtgcctggcagtgtggtgatggcgacctgggagggctcg
cggccgatgctggtggaagtgcaggcgctggtcgacaccagccacctggccaacccgcgg
cgggtgactctgggcctggatcagaaccgcctggccatgcttctggcggtgttgcaccgc
cacggcgggatcccgacctatgatcaggacgtattcctcaacgtagtcggtggggtcaag
gtgctggaaaccgcctctgatctcgcgctgatggcggcggtcatctccagcctgcgcaac
cgaccgttgcagcacgatttgctggtgttcggcgagattggtttgtccggtgagattcgc
ccggtaccgagtggccaggagcggctgaaagaggctgccaagcacggcttcaagcgtgcg
atcgtgcccaagggtaatgcaccgaaggaggctccgccgggcctgcagatagtcgctgtc
acgcgactggaacaggcgctggatgcgctgttcgaataa
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