Ectopseudomonas mendocina NK-01: MDS_1193
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Entry
MDS_1193 CDS
T01473
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmk03000
]
MDS_1193
Transcription factors [BR:
pmk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MDS_1193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
PBP_like
HTH_23
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEB57224
LinkDB
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Position
1300701..1301588
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AA seq
295 aa
AA seq
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MTVKQLRAFLAVAQSLSFAQACERLHLSQPALSLAIKNLEQSLGGQLLVRTTRSVALTPE
GETLLPIAVRLLADWDNAEDLLHQHFTLQMGKVAVAAMPSFAGNRLPAALRAFRDAYPRV
NVAVHDVINEQVMEMVRDGRVELGIAFEPTTLDGLQFTPLYEDRFVAVVPVASELAEQSA
LTWAQLLEQPFITLQRPSAVRLLLEDSVTASHGKLPVAFESHQLVTVGRMVAEGLGVSAV
PQLCRQQMEELGARCLPLSEPQVSRRVGLLHQAGHQLSSAAQALSETLIGMARTG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaagcagctacgcgcctttctcgctgtggcgcagagcctgagcttcgcccag
gcttgcgagcgcctgcatctgtcgcagccggcgctgagcctggcgatcaagaatctggag
caatcgctcggcggccagttgctggtgcgcaccacccgcagcgtggcgctgacgccggag
ggcgagacgctgctgccgattgccgtgcgcctgctggcggactgggacaacgccgaggat
ctattgcaccagcacttcaccctgcagatgggcaaggtggcggtggcggccatgccgtcg
ttcgccggcaaccgcttaccggcggcgctgcgcgccttccgcgatgcctacccacgggtc
aacgtggcggtgcacgacgtgatcaacgaacaggtgatggaaatggtgcgcgatggtcgt
gtcgaactgggcatcgccttcgagccaacgacactggatggcttgcagttcacacccctg
tatgaggaccgtttcgtcgccgtagtgccggtcgccagcgagttggctgaacagtccgcg
ctgacctgggcacagctgctggaacaacccttcatcaccctgcagcggccctcggcggtg
cgtttgctgctggaggacagcgttaccgccagccacggcaagctaccggtggcgttcgag
agccatcagttggtcacggtcgggcgcatggtcgccgagggtctcggcgtcagcgctgtg
ccgcagctgtgtcggcaacagatggaagaactcggcgcgcgctgcctaccgctgagcgag
ccgcaggtatcgcgccgcgtcggcctgctgcaccaggctgggcatcagctatccagcgcg
gcgcaggcgttgagtgagaccctgattgggatggctagaaccggataa
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