Ectopseudomonas mendocina NK-01: MDS_1296
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Entry
MDS_1296 CDS
T01473
Name
(GenBank) outer membrane porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk01501
beta-Lactam resistance
pmk02020
Two-component system
Module
pmk_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MDS_1296
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MDS_1296
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmk02000
]
MDS_1296
01504 Antimicrobial resistance genes [BR:
pmk01504
]
MDS_1296
Transporters [BR:
pmk02000
]
Other transporters
Pores ion channels [TC:
1
]
MDS_1296
Antimicrobial resistance genes [BR:
pmk01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
MDS_1296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AEB57327
LinkDB
All DBs
Position
complement(1419302..1420606)
Genome browser
AA seq
434 aa
AA seq
DB search
MQVMKWSVIALAVAAGTSQMAVASSQSESNGFIEDSSFNIFNRVLYMNRDFKNGASNGAS
TSANPAGYREETGLGIRLLYESGFTQGTVGVGFDAHSLSSIKLDSGRGRYGTGQFAQTDE
GRGDDTQTEVGGAVKLRISDTVLKYGSQFTASPVFSTDDSRILPEVTTGTYLVSNEIEGL
ELSAGRFTAMSSQTGTSRDDINGKGEAGLKYANIVGASYSFTDDLSAAFHASDVEDYWKK
YYGNVNYNLSLAEEQALNFDFNVYKTDYDKTYTNTASDEDNTIWSLAVAYSLGAHTFTLA
HQRSSGDRGYEYGVDGGGTVWLANSVQYSDFNGKDERSWQARYDLNMAEYGVPGLSFMTR
YIYGDNIDVAGFAEEGKEHEFNFETKYVVQDGAAKDLSFRVRSAIWRANSAYNSVNGSDN
NDLRLIVEYPLSVL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgatgaagtggagcgtaatcgccctggcagtagccgcgggcaccagccaaatg
gccgtggcgtccagccagtccgagtccaacggctttatcgaagacagcagcttcaacatc
ttcaaccgcgttctgtacatgaaccgcgacttcaagaatggtgcctcgaacggcgcaagc
acctccgccaacccggctggctaccgtgaagaaactggcctgggcatccgcctgctgtac
gaatccggcttcacccaaggtaccgtaggcgtaggtttcgacgctcactcactgagcagc
atcaagcttgacagcggtcgcggccgctacggcactggccagttcgcccagaccgatgaa
ggtcgtggcgacgacacccagaccgaagtcggcggcgctgtaaagctccgtatttccgac
actgttctgaagtatggcagtcagttcaccgccagcccggtattctccaccgacgacagc
cgcatcctgccagaagtcaccacaggtacctatctggtaagtaacgaaattgaaggccta
gaactaagcgccggtcgcttcaccgccatgagcagccagaccggcaccagccgcgacgac
atcaacggcaaaggtgaagctggcctgaagtacgctaacatcgtgggggcttcctactcg
ttcaccgatgacctgagtgcagcattccacgcctccgatgtagaagactactggaagaag
tactacggtaacgtcaactacaacctgtcgctggccgaagagcaggctctgaacttcgat
ttcaacgtctacaagaccgactacgacaagacctacaccaatactgctagcgacgaagac
aacactatctggagtcttgcagttgcctactcgctgggcgcccacactttcaccctggcc
caccaacgctcgagcggtgaccgtggctatgaatacggcgtagacggcggcggtaccgtc
tggctggccaactccgtgcaatactccgacttcaatggcaaggacgaacgctcttggcag
gctcgctacgacctgaacatggccgagtatggcgtaccgggtctgagcttcatgactcgc
tacatctacggtgacaatatcgacgttgcaggttttgctgaggaaggcaaagaacacgag
ttcaacttcgaaactaaatacgtcgttcaggatggcgccgccaaagacctgtcgttccgc
gttcgtagcgccatctggcgtgccaacagtgcatacaactcggtaaacggttcagacaac
aatgacctgcgcctgatcgtcgagtacccgctgagcgttctgtaa
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